CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51389	Canola	cytosol, peroxisome, plastid	92.92	93.14
CDX89881	Canola	plastid	86.56	86.35
CDY69821	Canola	plastid	77.59	83.72
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	84.67	77.71
CDY21964	Canola	plastid	76.65	74.03
CDY48559	Canola	plastid	76.65	73.86
VIT_12s0059g01820.t01	Wine grape	plastid	72.41	64.9
KRH25524	Soybean	nucleus	71.93	64.76
KRH22416	Soybean	nucleus, plastid	72.41	64.63
KRH56012	Soybean	nucleus	71.46	64.33
PGSC0003DMT400047180	Potato	plastid	70.99	63.77
KRH26917	Soybean	cytosol, plastid	71.23	63.71
Solyc10g008490.2.1	Tomato	plastid	69.58	62.9
Solyc07g054300.2.1	Tomato	plastid	69.58	62.5
PGSC0003DMT400055813	Potato	plastid	69.1	62.34
CDY72270	Canola	cytosol	28.07	56.4
Os07t0566200-01	Rice	plasma membrane	55.42	55.04
EER99559	Sorghum	plastid	55.9	54.99
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	55.42	54.91
Zm00001d006614_P001	Maize	plastid	55.66	54.63
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	55.42	54.52
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	55.42	54.52
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	54.95	54.06
Zm00001d021817_P001	Maize	plastid	54.72	53.83
GSMUA_Achr9P24510_001	Banana	plastid	52.83	53.33
HORVU2Hr1G084080.1	Barley	cytosol, plastid	17.69	48.08
CDX91383	Canola	cytosol	35.85	47.5
CDY46975	Canola	cytosol, mitochondrion, peroxisome	33.96	46.3
CDY40298	Canola	cytosol, peroxisome, plastid	39.39	46.26
CDY70364	Canola	cytosol, peroxisome	38.92	45.58
CDY53741	Canola	plastid	49.76	45.18
CDY53743	Canola	plastid	49.76	45.09
CDX92009	Canola	plastid	50.24	45.03
CDY33350	Canola	cytosol, nucleus, plastid	49.76	43.96
CDY00978	Canola	cytosol	36.32	43.87
CDY35072	Canola	cytosol, peroxisome, plastid	49.76	43.78
CDX88554	Canola	nucleus	49.29	43.72
CDX74239	Canola	plastid	49.53	43.21
CDY37649	Canola	mitochondrion, plastid	43.63	43.02
CDY63003	Canola	mitochondrion, plastid	43.87	42.47
CDX87369	Canola	nucleus	48.58	41.87
CDX72381	Canola	cytosol	32.08	41.72
CDX80553	Canola	cytosol	33.25	41.72
CDY56581	Canola	cytosol	33.25	41.47
CDX88210	Canola	cytosol	33.02	41.42
CDY45023	Canola	cytosol	31.84	41.41
CDY28276	Canola	cytosol	31.84	41.41
CDY13509	Canola	cytosol	31.13	40.49
CDY18810	Canola	cytosol, nucleus, peroxisome	33.02	40.23
CDY28706	Canola	cytosol, peroxisome, plastid	49.53	39.62
CDY51537	Canola	cytosol, peroxisome, plastid	49.76	39.59
CDY53338	Canola	cytosol, mitochondrion, nucleus	34.67	39.41
CDY05554	Canola	nucleus	34.2	39.4
CDY19742	Canola	nucleus	34.43	39.14
CDX97493	Canola	cytosol	30.42	38.86
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	35.14	38.7
CDY25013	Canola	nucleus	34.2	38.67
CDX95903	Canola	nucleus	29.95	36.18
CDY50503	Canola	nucleus	29.95	36.18
CDY67911	Canola	nucleus	29.95	36.18
CDX92097	Canola	nucleus	29.72	35.9
CDY34568	Canola	cytosol	11.08	33.57
CDX74112	Canola	plastid	19.81	23.73
CDY08060	Canola	plastid	19.34	23.16
CDY18847	Canola	cytosol	17.69	23.01
CDX82702	Canola	nucleus	17.45	16.44
CDY05716	Canola	cytosol	27.59	10.86
CDY35922	Canola	cytosol	27.59	10.82

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078FQN6	UniProt:A0A078FQN6
EnsemblPlants:CDY15466	ProteinID:CDY15466	ProteinID:CDY15466.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00089634001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EDB988	SEG:seg	:	:	:

Description

BnaA08g27500DBnaA08g27500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQN6]

Coordinates

chrLK032055:-:136937..139079

Molecular Weight (calculated)

46955.4 Da

IEP (calculated)

5.250

GRAVY (calculated)

-0.410

Length

424 amino acids

Sequence
(BLAST)

001: MGGCVSKSNE EPMYRPRLGM GCCGSKMGRR TLSGRIVSLH DLVSIPNRIT SSGKSKSSCV FTQQGRKGVN QDSMIVWEDF MSKDMTFCGV FDGHGPNGHL
101: VSRKVRESLP VRLLSFMHSI HEEDKLKLLW EEAFLKSFNA MDKELRSHPN VECFCSGSTA VTIIKQGSHL FMGNIGDSRA ILGSKDSNDS MVAVQLTVDL
201: KPDLPREAER IKQCKGRVFA LEDEPEVPRV WLPFDNAPGL AMARAFGDFC VKDYGVISIP DFSHRLLTDR DQFIVLASDG VWDVLSNEEV VEVVASASSR
301: ASAARLVVDS ASREWKLKYP TSKMDDCAVV CLFLDGKMDS ESSYYEEQRS SSVESDESQR TEPCLQRNAT VRSSSVESNS CGNENAETDD AEKEKATEGE
401: QHWSGLEGVT RVNSLVQLPR FSGD

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.