CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035360.1-P	Field mustard	plastid	99.09	99.09
CDY72270	Canola	cytosol	47.03	97.63
CDY37649	Canola	mitochondrion, plastid	94.98	96.74
CDX91383	Canola	cytosol	69.18	94.69
CDY70364	Canola	cytosol, peroxisome	77.4	93.65
CDY00978	Canola	cytosol	73.97	92.31
CDY46975	Canola	cytosol, mitochondrion, peroxisome	64.38	90.68
CDY34568	Canola	cytosol	27.63	86.43
CDX97493	Canola	cytosol	64.84	85.54
AT5G36250.2	Thale cress	plastid	86.99	82.47
CDY56581	Canola	cytosol	62.33	80.29
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	22.6	57.89
CDY53743	Canola	plastid	58.45	54.7
CDY53741	Canola	plastid	57.99	54.39
CDX92009	Canola	plastid	56.62	52.43
KRG93121	Soybean	plastid	43.38	52.05
CDX74239	Canola	plastid	55.94	50.41
KRH36356	Soybean	cytosol	23.52	49.52
KRH01535	Soybean	cytosol	49.77	47.91
CDY51537	Canola	cytosol, peroxisome, plastid	57.99	47.65
CDY69821	Canola	plastid	42.69	47.58
CDY28706	Canola	cytosol, peroxisome, plastid	57.53	47.55
CDY40298	Canola	cytosol, peroxisome, plastid	38.81	47.09
CDX89881	Canola	plastid	42.69	44.0
CDY15466	Canola	cytosol, peroxisome, plastid	42.47	43.87
CDY21964	Canola	plastid	43.84	43.74
CDY48559	Canola	plastid	43.84	43.64
CDY51389	Canola	cytosol, peroxisome, plastid	42.01	43.5
CDY33350	Canola	cytosol, nucleus, plastid	47.26	43.12
CDX88554	Canola	nucleus	47.03	43.1
CDY35072	Canola	cytosol, peroxisome, plastid	47.26	42.95
CDY67911	Canola	nucleus	33.56	41.88
CDY50503	Canola	nucleus	33.56	41.88
CDX87369	Canola	nucleus	47.03	41.87
CDY18810	Canola	cytosol, nucleus, peroxisome	33.1	41.67
CDX80553	Canola	cytosol	31.74	41.12
CDY28276	Canola	cytosol	30.59	41.1
CDY05554	Canola	nucleus	34.47	41.03
CDX88210	Canola	cytosol	31.51	40.83
CDX72381	Canola	cytosol	30.37	40.8
CDY45023	Canola	cytosol	30.37	40.8
CDY13509	Canola	cytosol	30.14	40.49
CDY53338	Canola	cytosol, mitochondrion, nucleus	34.47	40.48
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	35.39	40.26
CDY19742	Canola	nucleus	34.25	40.21
CDX95903	Canola	nucleus	32.19	40.17
CDY25013	Canola	nucleus	34.25	40.0
CDX92097	Canola	nucleus	31.51	39.32
KRH45222	Soybean	nucleus	18.95	35.78
CDY08060	Canola	plastid	19.18	23.73
CDX74112	Canola	plastid	19.18	23.73
CDY18847	Canola	cytosol	17.35	23.31
CDX82702	Canola	nucleus	18.49	18.0
CDY05716	Canola	cytosol	23.52	9.56
CDY35922	Canola	cytosol	23.52	9.53

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078J886	UniProt:A0A078J886
EnsemblPlants:CDY63003	ProteinID:CDY63003	ProteinID:CDY63003.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00037843001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EEBEB9	SEG:seg	:	:	:

Description

BnaAnng18490DBnaAnng18490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J886]

Coordinates

chrLK034232:-:14764..17380

Molecular Weight (calculated)

48276.5 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.389

Length

438 amino acids

Sequence
(BLAST)

001: MGSCLSSGET RRRRSIPPGG SNRRRRKSSS KRRSCSSSFD NTGGEDEPLL HRIPGRMFLN GSTDHASLFS QQGKKGPNQD AMIVWENFGS MADTVFCGVF
101: DGHGPYGHVI AKRVRDLLPL KLGSHLESSY VSCEEVLKEI SLNTADRKTS ESLVHISANG ESRVYNKDQD MVQTLLTSIV KAYRFMDKEL KMQVDVDCFC
201: SGTTAVTMVK QGQHLVVGNI GDSRAVLGTR NKENKLVPFQ LTEDLKPDVP AEAARIKRCR GRIFALRDEP GVARLWLPNH NSPGLAMARA FGDFCLKDFG
301: LISVPDVSYR RLTEKDEFVV LATDGIWDVL TNEEVVEIVA KAPTRCTAGR ALVEAAVRNW RWKFPTSKVD DCAVVCLFLD SKPDKLSTAS FSVDKHISNG
401: LSEPDTASTS TPGSGTESPE LNGVDRIVNL HMHVPTKE

Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.