CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91383	Canola	cytosol	95.73	63.12
CDY00978	Canola	cytosol	95.26	57.27
CDY46975	Canola	cytosol, mitochondrion, peroxisome	81.04	54.98
CDY70364	Canola	cytosol, peroxisome	93.84	54.7
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	43.6	53.8
CDX97493	Canola	cytosol	78.67	50.0
CDY56581	Canola	cytosol	77.73	48.24
CDY37649	Canola	mitochondrion, plastid	96.68	47.44
CDY63003	Canola	mitochondrion, plastid	97.63	47.03
KRH36356	Soybean	cytosol	42.18	42.79
AT5G36250.2	Thale cress	plastid	91.0	41.56
CDY69821	Canola	plastid	58.29	31.3
CDY53743	Canola	plastid	69.19	31.2
CDY53741	Canola	plastid	68.72	31.05
CDY40298	Canola	cytosol, peroxisome, plastid	53.08	31.02
KRG93121	Soybean	plastid	53.55	30.96
CDX92009	Canola	plastid	68.25	30.44
KRH01535	Soybean	cytosol	63.03	29.23
CDX74239	Canola	plastid	67.3	29.22
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	53.08	29.09
CDY45023	Canola	cytosol	44.55	28.83
CDY28276	Canola	cytosol	44.55	28.83
CDX80553	Canola	cytosol	45.97	28.7
CDY50503	Canola	nucleus	47.39	28.49
CDY67911	Canola	nucleus	47.39	28.49
CDX89881	Canola	plastid	57.35	28.47
CDX88210	Canola	cytosol	45.5	28.4
CDY51389	Canola	cytosol, peroxisome, plastid	56.4	28.13
CDY15466	Canola	cytosol, peroxisome, plastid	56.4	28.07
CDX88554	Canola	nucleus	63.51	28.03
CDY13509	Canola	cytosol	43.13	27.91
CDY35072	Canola	cytosol, peroxisome, plastid	63.51	27.8
CDY51537	Canola	cytosol, peroxisome, plastid	70.14	27.77
CDY28706	Canola	cytosol, peroxisome, plastid	69.67	27.74
CDY33350	Canola	cytosol, nucleus, plastid	63.03	27.71
CDX72381	Canola	cytosol	42.65	27.61
CDX95903	Canola	nucleus	45.5	27.35
CDY21964	Canola	plastid	56.87	27.33
CDY48559	Canola	plastid	56.87	27.27
CDX92097	Canola	nucleus	45.02	27.07
CDX87369	Canola	nucleus	63.03	27.03
CDY18810	Canola	cytosol, nucleus, peroxisome	44.55	27.01
CDY05554	Canola	nucleus	46.45	26.63
CDY53338	Canola	cytosol, mitochondrion, nucleus	45.97	26.01
CDY25013	Canola	nucleus	45.97	25.87
CDY19742	Canola	nucleus	45.5	25.74
CDY34568	Canola	cytosol	12.8	19.29
CDY08060	Canola	plastid	26.07	15.54
CDX74112	Canola	plastid	26.07	15.54
CDY18847	Canola	cytosol	21.8	14.11
CDX82702	Canola	nucleus	23.22	10.89
CDY05716	Canola	cytosol	30.33	5.94
CDY35922	Canola	cytosol	30.33	5.92
KRH45222	Soybean	nucleus	1.9	1.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078K0V1	UniProt:A0A078K0V1
EnsemblPlants:CDY72270	ProteinID:CDY72270	ProteinID:CDY72270.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00026121001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EDC797	:	:	:	:

Description

BnaC04g55660DBnaC04g55660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0V1]

Coordinates

chrLK049826:+:288..1317

Molecular Weight (calculated)

23393.1 Da

IEP (calculated)

6.746

GRAVY (calculated)

-0.101

Length

211 amino acids

Sequence
(BLAST)

001: MQVDVDCFCS GTTAVTMVKQ GQHLVVGNIG DSRAVLGTRN KENKLVPFQL TEDLKPDVPA EAARIKRCRG RIFALRDEPG VARLWLPNHN SPGLAMARAF
101: EDFCLKDFGL ISVPDVSYRR LTEKDEFVVL ATDWIWDVLT NEEVVEIVAK APTPCTAGRA LVEAAVRNWR WKFPTSKVDD CGVVCLFLDS KPDKLSTASF
201: SVDKHISNGL T

Best Arabidopsis Sequence Match ( AT1G79630.3 )
(BLAST)

001: MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML KSCQQIDKEL
101: KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS DSPGLAMARA
201: FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ DSSVAMEVST
301: NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.