CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48559	Canola	plastid	99.54	99.32
Bra034206.1-P	Field mustard	plastid	99.54	93.98
AT4G03415.2	Thale cress	plastid	92.26	86.54
CDY15466	Canola	cytosol, peroxisome, plastid	74.03	76.65
CDX89881	Canola	plastid	74.03	76.47
CDY51389	Canola	cytosol, peroxisome, plastid	72.44	75.18
CDY69821	Canola	plastid	66.51	74.3
VIT_12s0059g01820.t01	Wine grape	plastid	78.82	73.15
KRH25524	Soybean	nucleus	77.9	72.61
KRH56012	Soybean	nucleus	77.45	72.19
KRH22416	Soybean	nucleus, plastid	77.22	71.37
KRH26917	Soybean	cytosol, plastid	76.99	71.31
PGSC0003DMT400047180	Potato	plastid	75.4	70.13
Solyc07g054300.2.1	Tomato	plastid	74.94	69.7
Solyc10g008490.2.1	Tomato	plastid	72.67	68.02
PGSC0003DMT400055813	Potato	plastid	72.21	67.45
EER99559	Sorghum	plastid	58.54	59.63
Os07t0566200-01	Rice	plasma membrane	57.63	59.25
Zm00001d006614_P001	Maize	plastid	57.63	58.56
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	57.4	58.47
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	57.4	58.47
Zm00001d021817_P001	Maize	plastid	57.18	58.24
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	56.72	58.18
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	56.95	58.0
GSMUA_Achr9P24510_001	Banana	plastid	54.67	57.14
CDY72270	Canola	cytosol	27.33	56.87
HORVU2Hr1G084080.1	Barley	cytosol, plastid	19.36	54.49
CDX91383	Canola	cytosol	35.54	48.75
CDY46975	Canola	cytosol, mitochondrion, peroxisome	33.94	47.91
CDY70364	Canola	cytosol, peroxisome	38.95	47.24
CDY40298	Canola	cytosol, peroxisome, plastid	37.81	45.98
CDY53743	Canola	plastid	48.97	45.94
CDY53741	Canola	plastid	48.75	45.82
CDX92009	Canola	plastid	48.75	45.24
CDY00978	Canola	cytosol	35.99	45.01
CDX88554	Canola	nucleus	48.75	44.77
CDY37649	Canola	mitochondrion, plastid	43.51	44.42
CDY63003	Canola	mitochondrion, plastid	43.74	43.84
CDY35072	Canola	cytosol, peroxisome, plastid	48.06	43.78
CDY33350	Canola	cytosol, nucleus, plastid	47.38	43.33
CDX74239	Canola	plastid	47.84	43.21
CDX87369	Canola	nucleus	48.29	43.09
CDY56581	Canola	cytosol	32.8	42.35
CDY28706	Canola	cytosol, peroxisome, plastid	48.97	40.57
CDY51537	Canola	cytosol, peroxisome, plastid	48.97	40.34
CDX80553	Canola	cytosol	30.98	40.24
CDY05554	Canola	nucleus	33.49	39.95
CDX88210	Canola	cytosol	30.75	39.94
CDX72381	Canola	cytosol	29.61	39.88
CDX97493	Canola	cytosol	30.07	39.76
CDY18810	Canola	cytosol, nucleus, peroxisome	31.44	39.66
CDY28276	Canola	cytosol	29.39	39.57
CDY25013	Canola	nucleus	33.71	39.47
CDY53338	Canola	cytosol, mitochondrion, nucleus	33.49	39.41
CDY45023	Canola	cytosol	29.16	39.26
CDY19742	Canola	nucleus	33.26	39.14
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	33.94	38.7
CDY13509	Canola	cytosol	28.7	38.65
CDY50503	Canola	nucleus	29.16	36.47
CDY67911	Canola	nucleus	29.16	36.47
CDX95903	Canola	nucleus	28.93	36.18
CDX92097	Canola	nucleus	28.7	35.9
CDY34568	Canola	cytosol	11.39	35.71
CDX74112	Canola	plastid	20.05	24.86
CDY08060	Canola	plastid	19.82	24.58
CDY18847	Canola	cytosol	18.0	24.23
CDX82702	Canola	nucleus	15.26	14.89
CDY05716	Canola	cytosol	28.02	11.42
CDY35922	Canola	cytosol	28.02	11.38

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078G9B0	UniProt:A0A078G9B0
EnsemblPlants:CDY21964	ProteinID:CDY21964	ProteinID:CDY21964.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00018299001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE8E4B	SEG:seg	:	:	:

Description

BnaC09g00700DBnaC09g00700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9B0]

Coordinates

chrLK032126:-:392759..396672

Molecular Weight (calculated)

48590.2 Da

IEP (calculated)

6.024

GRAVY (calculated)

-0.418

Length

439 amino acids

Sequence
(BLAST)

001: MGGCVSTSSK STCSSWSNGE KPMPRPYLGI GCCVSKRAKR TFSDHILSLQ NLASIPNRII TSGKSRSSCV FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPFGHL VARKVRDTLP VKLQSFFHAL QSKQNGRFRR KAFFKSFKAM DKELRSHPNV DCFCSGSTAV TILKQGSNLF MGNIGDSRAI LGSKDSNDTM
201: VATQLTVDLK PDLPREAERI KRCKGRVFAL QDEPEVSRVW LPFDDAPGLA MARAFGDFCL KEYGVISIPE FTHRVLTDKD QFIVLASDGI WDVLSNEEVV
301: DIVASSSSRA SAARILVNSA AREWKLKYPT SKMDDCAVVC LFLDGKMDSE SDYDEQGFSS ATNAVESDDG QRSEPCLQRN FTVRSSSDQE NETYGNNVNA
401: DTEGEDEKTV GDQNWLGLEG VTRVNSLVQL PRFSEESKT

Best Arabidopsis Sequence Match ( AT4G03415.2 )
(BLAST)

001: MGGCVSTSSK STCSSWSNGE KPVRRPYLGI GCCVSKRAKR TFSDHIVSLQ NLTSIPNRIT SSSKSRSSCI FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT

Arabidopsis Description

PP2C52 [Source:UniProtKB/TrEMBL;Acc:A0A178UVG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.