CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033411.1-P	Field mustard	mitochondrion	93.65	94.09
CDY69821	Canola	plastid	86.12	93.13
CDY15466	Canola	cytosol, peroxisome, plastid	86.35	86.56
CDY51389	Canola	cytosol, peroxisome, plastid	83.53	83.92
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	86.35	79.44
CDY48559	Canola	plastid	76.94	74.32
CDY21964	Canola	plastid	76.47	74.03
KRH22416	Soybean	nucleus, plastid	74.59	66.74
KRH25524	Soybean	nucleus	73.65	66.45
VIT_12s0059g01820.t01	Wine grape	plastid	73.88	66.38
KRH56012	Soybean	nucleus	73.41	66.24
PGSC0003DMT400047180	Potato	plastid	73.41	66.1
KRH26917	Soybean	cytosol, plastid	73.65	66.03
Solyc07g054300.2.1	Tomato	plastid	72.24	65.04
PGSC0003DMT400055813	Potato	plastid	71.29	64.47
Solyc10g008490.2.1	Tomato	plastid	71.06	64.39
CDY72270	Canola	cytosol	28.47	57.35
Os07t0566200-01	Rice	plasma membrane	57.18	56.91
EER99559	Sorghum	plastid	57.65	56.84
Zm00001d006614_P001	Maize	plastid	57.41	56.48
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	56.94	56.15
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	56.94	56.15
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	56.47	56.07
GSMUA_Achr9P24510_001	Banana	plastid	55.29	55.95
Zm00001d021817_P001	Maize	plastid	56.71	55.92
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	56.24	55.45
HORVU2Hr1G084080.1	Barley	cytosol, plastid	18.35	50.0
CDX91383	Canola	cytosol	36.24	48.12
CDY46975	Canola	cytosol, mitochondrion, peroxisome	34.35	46.95
CDY53743	Canola	plastid	50.59	45.94
CDY53741	Canola	plastid	50.35	45.82
CDY40298	Canola	cytosol, peroxisome, plastid	38.82	45.71
CDY70364	Canola	cytosol, peroxisome	38.82	45.58
CDX92009	Canola	plastid	50.35	45.24
CDY33350	Canola	cytosol, nucleus, plastid	50.12	44.38
CDY35072	Canola	cytosol, peroxisome, plastid	50.12	44.19
CDY00978	Canola	cytosol	36.47	44.16
CDX88554	Canola	nucleus	49.65	44.14
CDY37649	Canola	mitochondrion, plastid	43.76	43.26
CDX74239	Canola	plastid	49.41	43.21
CDY63003	Canola	mitochondrion, plastid	44.0	42.69
CDX87369	Canola	nucleus	48.94	42.28
CDX72381	Canola	cytosol	32.24	42.02
CDX80553	Canola	cytosol	33.41	42.01
CDY56581	Canola	cytosol	33.41	41.76
CDX88210	Canola	cytosol	33.18	41.72
CDY28276	Canola	cytosol	31.76	41.41
CDY45023	Canola	cytosol	31.76	41.41
CDY13509	Canola	cytosol	31.29	40.8
CDY18810	Canola	cytosol, nucleus, peroxisome	33.18	40.52
CDY28706	Canola	cytosol, peroxisome, plastid	49.88	40.0
CDY51537	Canola	cytosol, peroxisome, plastid	50.12	39.96
CDY53338	Canola	cytosol, mitochondrion, nucleus	34.59	39.41
CDY05554	Canola	nucleus	34.12	39.4
CDY19742	Canola	nucleus	34.35	39.14
CDY25013	Canola	nucleus	34.35	38.93
CDX97493	Canola	cytosol	30.35	38.86
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	34.59	38.18
CDY50503	Canola	nucleus	30.82	37.32
CDY67911	Canola	nucleus	30.82	37.32
CDX95903	Canola	nucleus	30.35	36.75
CDX92097	Canola	nucleus	30.12	36.47
CDY34568	Canola	cytosol	10.82	32.86
CDX74112	Canola	plastid	20.94	25.14
CDY08060	Canola	plastid	20.71	24.86
CDY18847	Canola	cytosol	18.82	24.54
CDX82702	Canola	nucleus	17.41	16.44
CDY05716	Canola	cytosol	29.41	11.61
CDY35922	Canola	cytosol	29.41	11.56

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078DKV7	EnsemblPlants:CDX89881
ProteinID:CDX89881	ProteinID:CDX89881.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00150358001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0004EDED52	SEG:seg	:	:	:	:

Description

BnaA10g02010D

Coordinates

chrLK031861:+:585899..588762

Molecular Weight (calculated)

46918.3 Da

IEP (calculated)

4.923

GRAVY (calculated)

-0.404

Length

425 amino acids

Sequence
(BLAST)

001: MGGCVSKSNE ETMYRPCLGM GCCGSKMGRR TSSGRIVSLN NLVSIPNRIT SNGKSKSSCI FTQQGRKGVN QDSMIVWEDF ISKDVTFCGV FDGHGPHGHL
101: VSRKVRESLP VRLLSFEEAS EEDKLKLLWE EAFLKAFSAM DKELRSHPNV ECFCSGSTAV TVIKQGSNLF MGNIGDSRAI LGSKDSNDSM VATQLTVDLK
201: PDLPREAERI KQCKGRVFAL EDEPEVPRVW LPYDNAPGLA MARAFGDFCL KDYGVISVPE FSHRVLTDRD QFIVLASDGV WDVLSNEEVV EVVASAPRRA
301: SAARLVVDSA AREWKLKYPT SKMDDCAVVC LFLDGKMDSD SSDYEEQGYY SSATNAVEES EESQVNAEPC LQRNVTVRAS TEYGNVNAEK EKKSEGEQNW
401: SGLEGVTRVN SLVQLPRFSG EETKT

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.