Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009875.1-P | Field mustard | cytosol | 99.41 | 99.41 |
| CDX80553 | Canola | cytosol | 97.04 | 97.04 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 81.95 | 83.69 |
| PGSC0003DMT400005637 | Potato | cytosol | 34.02 | 58.97 |
| Zm00001d009234_P001 | Maize | cytosol, peroxisome, plastid | 13.31 | 53.57 |
| Solyc08g065670.2.1 | Tomato | peroxisome | 48.22 | 53.27 |
| Solyc08g065500.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 51.48 | 51.79 |
| VIT_04s0008g00740.t01 | Wine grape | cytosol | 53.25 | 51.58 |
| Solyc08g065540.2.1 | Tomato | cytosol, nucleus, peroxisome | 49.41 | 50.3 |
| KRH52174 | Soybean | cytoskeleton, cytosol, peroxisome | 50.3 | 49.56 |
| CDY45023 | Canola | cytosol | 47.63 | 49.39 |
| CDX72381 | Canola | cytosol | 47.63 | 49.39 |
| CDY28276 | Canola | cytosol | 47.63 | 49.39 |
| GSMUA_Achr2P15710_001 | Banana | cytosol, peroxisome, plastid | 45.86 | 49.36 |
| CDY13509 | Canola | cytosol | 47.04 | 48.77 |
| GSMUA_Achr7P09260_001 | Banana | nucleus | 47.04 | 47.75 |
| KRH05503 | Soybean | cytoskeleton, cytosol, peroxisome | 47.63 | 46.8 |
| CDY72270 | Canola | cytosol | 28.4 | 45.5 |
| HORVU6Hr1G039940.1 | Barley | nucleus, peroxisome, plastid | 45.27 | 43.22 |
| TraesCS6B01G216900.1 | Wheat | nucleus, peroxisome, plastid | 45.27 | 42.86 |
| KRH15511 | Soybean | cytosol, nucleus, peroxisome | 30.18 | 42.86 |
| TraesCS6D01G178400.1 | Wheat | cytosol, nucleus, peroxisome | 45.27 | 42.62 |
| TraesCS6A01G187700.1 | Wheat | cytosol, nucleus, peroxisome | 44.97 | 42.11 |
| Solyc08g065680.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 25.44 | 41.95 |
| Zm00001d016332_P001 | Maize | cytosol, nucleus, peroxisome | 45.27 | 40.58 |
| EES04776 | Sorghum | cytosol, peroxisome, plastid | 45.27 | 40.16 |
| Zm00001d009620_P001 | Maize | cytosol, peroxisome, plastid | 18.34 | 38.99 |
| Os02t0224100-01 | Rice | cytosol, peroxisome, plastid | 43.79 | 38.05 |
| CDX91383 | Canola | cytosol | 34.91 | 36.88 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 39.35 | 36.84 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 33.73 | 36.66 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 37.57 | 36.49 |
| CDY69821 | Canola | plastid | 41.42 | 35.62 |
| CDY05554 | Canola | nucleus | 38.76 | 35.6 |
| CDY67911 | Canola | nucleus | 36.69 | 35.33 |
| CDY50503 | Canola | nucleus | 36.69 | 35.33 |
| CDX92097 | Canola | nucleus | 36.09 | 34.76 |
| CDX95903 | Canola | nucleus | 36.09 | 34.76 |
| CDY25013 | Canola | nucleus | 38.46 | 34.67 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 38.17 | 34.58 |
| CDY19742 | Canola | nucleus | 38.17 | 34.58 |
| Zm00001d053566_P002 | Maize | nucleus, peroxisome, plastid | 46.15 | 34.36 |
| CDY70364 | Canola | cytosol, peroxisome | 36.39 | 33.98 |
| CDY00978 | Canola | cytosol | 34.91 | 33.62 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 37.87 | 33.25 |
| CDY56581 | Canola | cytosol | 33.43 | 33.24 |
| CDX89881 | Canola | plastid | 41.72 | 33.18 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 41.42 | 33.02 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 41.12 | 32.86 |
| CDY37649 | Canola | mitochondrion, plastid | 40.83 | 32.09 |
| CDY63003 | Canola | mitochondrion, plastid | 40.83 | 31.51 |
| CDY21964 | Canola | plastid | 39.94 | 30.75 |
| CDY48559 | Canola | plastid | 39.94 | 30.68 |
| CDY53741 | Canola | plastid | 41.72 | 30.19 |
| CDX97493 | Canola | cytosol | 29.59 | 30.12 |
| CDY53743 | Canola | plastid | 41.42 | 29.91 |
| CDX92009 | Canola | plastid | 41.42 | 29.6 |
| CDX88554 | Canola | nucleus | 40.83 | 28.87 |
| CDX74239 | Canola | plastid | 41.12 | 28.6 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 39.65 | 27.92 |
| CDX87369 | Canola | nucleus | 40.53 | 27.85 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 39.35 | 27.59 |
| CDY34568 | Canola | cytosol | 11.24 | 27.14 |
| CDX74112 | Canola | plastid | 28.4 | 27.12 |
| CDY08060 | Canola | plastid | 28.11 | 26.84 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 40.83 | 25.89 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 40.53 | 25.85 |
| CDY18847 | Canola | cytosol | 23.67 | 24.54 |
| CDX82702 | Canola | nucleus | 21.3 | 16.0 |
| CDY05716 | Canola | cytosol | 27.22 | 8.54 |
| CDY35922 | Canola | cytosol | 27.22 | 8.51 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078DG85 | EnsemblPlants:CDX88210 |
| ProteinID:CDX88210 | ProteinID:CDX88210.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00147676001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF315 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EF3343 | SEG:seg | : | : | : | : |
Description
BnaA06g28010D
Coordinates
chrLK031854:-:1384277..1386195
Molecular Weight (calculated)
37288.3 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.261
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHCFSLPSS SSEIHEENEH GDGNAVVCYG DEFGLDHYRP VHRPGSVCSI QGTKAINQDN AILYLGYGTE EAELCGVFDG HGKNGHMVSK MARNRLPSLL
101: LTLKKELNEE PHACEEDEAL KWEKACFNAF RLIDRELMLQ VFNCSFSGST AVVAITQGDD LMIANLGDSR AVLGTMTEDG EICAVQLTSD LTPDVPSEAE
201: RIRACRGRVH AMKAEPSSQR VWLPNQDIPG LAMSRAFGDF RLKDYGVIAV PEVSHHRITS KDRFLVLASD GVWDMLTNDE VVSLIWNSGK TQDMAAKLVA
301: EVAEATWKKK LKSKKIDDIT VICLFLQNKE QPSCTADV
101: LTLKKELNEE PHACEEDEAL KWEKACFNAF RLIDRELMLQ VFNCSFSGST AVVAITQGDD LMIANLGDSR AVLGTMTEDG EICAVQLTSD LTPDVPSEAE
201: RIRACRGRVH AMKAEPSSQR VWLPNQDIPG LAMSRAFGDF RLKDYGVIAV PEVSHHRITS KDRFLVLASD GVWDMLTNDE VVSLIWNSGK TQDMAAKLVA
301: EVAEATWKKK LKSKKIDDIT VICLFLQNKE QPSCTADV
001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S
Arabidopsis Description
Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.