CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	92.91	93.9
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	71.92	77.4
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	72.44	77.31
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	72.18	76.6
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	71.92	75.9
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	74.54	73.01
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	49.61	60.19
GSMUA_Achr7P09260_001	Banana	nucleus	48.56	55.56
PGSC0003DMT400005637	Potato	cytosol	28.08	54.87
VIT_04s0008g00740.t01	Wine grape	cytosol	45.41	49.57
Solyc08g065670.2.1	Tomato	peroxisome	38.85	48.37
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	41.99	47.62
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	41.47	47.59
CDY45023	Canola	cytosol	40.68	47.55
Bra034542.1-P	Field mustard	cytosol	40.68	47.55
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	40.94	47.13
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	42.26	46.8
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	41.73	46.36
CDX80553	Canola	cytosol	40.94	46.15
CDY28276	Canola	cytosol	39.37	46.01
CDX72381	Canola	cytosol	39.37	46.01
Bra037033.1-P	Field mustard	cytosol	39.11	45.71
CDY13509	Canola	cytosol	39.11	45.71
AT4G32950.1	Thale cress	cytosol	38.85	45.4
Bra009875.1-P	Field mustard	cytosol	40.16	45.27
CDX88210	Canola	cytosol	40.16	45.27
KRH15511	Soybean	cytosol, nucleus, peroxisome	28.08	44.96
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	40.68	43.91
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	20.47	38.05
EER99559	Sorghum	plastid	41.47	36.66
EES03167	Sorghum	mitochondrion	39.63	32.68
KXG30134	Sorghum	nucleus	38.32	31.6
EES07864	Sorghum	cytosol, nucleus, peroxisome	39.37	31.58
KXG22794	Sorghum	cytosol, nucleus, peroxisome	40.94	31.01
EES06783	Sorghum	mitochondrion	40.68	29.69
KXG25674	Sorghum	mitochondrion	41.73	27.8
EER99809	Sorghum	plastid	26.25	21.93
EES04932	Sorghum	cytosol, plastid	27.3	9.61

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	EntrezGene:8073783	UniProt:C5XYG1	EnsemblPlants:EES04776
ProteinID:EES04776	ProteinID:EES04776.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G096300	SUPFAM:SSF81606
unigene:Sbi.10808	UniParc:UPI0001A858B9	RefSeq:XP_002451800.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:8524045..8527043

Molecular Weight (calculated)

40883.1 Da

IEP (calculated)

5.895

GRAVY (calculated)

-0.308

Length

381 amino acids

Sequence
(BLAST)

001: MGICASSKRV QQEEDSDENV VYVMDEQGGG GGPDGDGHGR KVASLFSQKG KKGPNQDAVI LCQGFGMEDG VFCGVFDGHG RCGQYISKLV RDYLPFMILS
101: HRNALLLGSS EDDDDAAVFS DASPVASSAA SSTDGSGRSS PAPAAQLLEE WREACANAFQ AMDKELKLQA NVDCNFSGTT AVCAIKQGKD LIVANLGDSR
201: AVLATMSDTG YLKAVQLTTD QKPNVPQEAE RIKRCNGRVF ALKDEPSVLR VWLPDEDCPG LAMARSLGDY RLKRHGVVSE PEVTHRRVAP GDLFIILATD
301: GVWDVLSNEE VVSIVCATPR KQHASKAVAE AAAQRWRTRY PASRVDDCSA VCLFLRDQHD WASSVAAAKA KAAAARPPHA R

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.