CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031329_P002	Maize	nucleus	83.57	87.71
Os08t0500300-01	Rice	plasma membrane	74.13	79.85
TraesCS7A01G241800.1	Wheat	nucleus	72.9	79.58
HORVU7Hr1G049260.4	Barley	nucleus	72.38	79.46
TraesCS7D01G240800.1	Wheat	mitochondrion	76.22	75.83
TraesCS7B01G137400.2	Wheat	plastid	75.87	75.48
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	57.17	63.99
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	15.38	61.11
CDY33350	Canola	cytosol, nucleus, plastid	48.25	57.5
CDY35072	Canola	cytosol, peroxisome, plastid	48.08	57.05
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	47.9	56.85
AT1G16220.1	Thale cress	nucleus	48.25	56.21
CDX88554	Canola	nucleus	46.85	56.07
AT1G79630.1	Thale cress	nucleus	48.6	55.16
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	49.65	55.15
Bra035131.1-P	Field mustard	nucleus	46.85	55.03
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	49.13	54.56
CDX87369	Canola	nucleus	46.68	54.27
EER99559	Sorghum	plastid	38.64	51.28
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	47.38	49.09
KXG30134	Sorghum	nucleus	38.81	48.05
Solyc10g005640.2.1	Tomato	nucleus	46.68	48.02
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	28.5	46.18
EES03167	Sorghum	mitochondrion	36.19	44.81
Zm00001d008472_P001	Maize	cytosol	12.06	44.52
EES06783	Sorghum	mitochondrion	38.29	41.95
EES04776	Sorghum	cytosol, peroxisome, plastid	27.8	41.73
EES07864	Sorghum	cytosol, nucleus, peroxisome	34.09	41.05
KXG22794	Sorghum	cytosol, nucleus, peroxisome	34.79	39.56
EER99809	Sorghum	plastid	17.31	21.71
EES04932	Sorghum	cytosol, plastid	21.68	11.46

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	UniProt:A0A1B6PJ07	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG25674
ProteinID:KXG25674	ProteinID:KXG25674.1	ProteinID:OQU80977.1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	EnsemblPlantsGene:SORBI_3007G216600
SUPFAM:SSF81606	UniParc:UPI00081AD3E2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:64491685..64496450

Molecular Weight (calculated)

61651.4 Da

IEP (calculated)

5.642

GRAVY (calculated)

-0.384

Length

572 amino acids

Sequence
(BLAST)

001: MIQKLHKTCK LQASSKPYSH ITVCSQRTQH NSQAGSSSYH PHPVLHRVAS FLLAAMGSCL SSEAPAAGAG PAVWRKRRRG SREGAAGAGA GAGGGKKLPG
101: GGGEMTEDEL ARVSGRMCGN GASAVACLHT QQGRKGTNQD AMVVWESFDS SESIFCGVFD GHGPYGHFVA KKVRDSLPVK LRTQWQTSAN GGSSPHQNGS
201: ISGSINSEET GSIVDDEWGD GDDTEKLPEM FLPLKKSYLK AFKLMDKELK LHPTVDCFCS GSTAVTLVKQ GLDLVIGNLG DSRAIMGTRD ASNNLTALQL
301: TVDLKPNLPR EAARIQQCKG RVFALQDEPE VARVWLPNND SPGLAMARAF GDFCLKDYGL ISVPEISYRR LTEKDEFIIL ATDGVWDVLS NKEAVDIVAS
401: APSRATAARA LVDCAVRSWR LKFPTSKSDD CAVVCLFLDH EKSADLVQES EPSVETAEPT GEEVSTQDAS AEVDEEIADA SVHVSSAEHS AEATLEHSTT
501: LREVDEIVPV DETPILKEPE RCGSARSLAD CISTNEEEEW SALEGVTRVN SLLNLPRILS GDKRSTSWRK RR

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.