CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
peroxisome 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007050_P001	Maize	mitochondrion	91.01	91.41
Os07t0646100-00	Rice	plasma membrane	65.79	80.21
Zm00001d022347_P001	Maize	mitochondrion	75.88	74.89
TraesCS2D01G144500.3	Wheat	cytosol	75.44	74.62
TraesCS2B01G166100.3	Wheat	cytosol	75.88	74.09
TraesCS2A01G141100.2	Wheat	cytosol	75.22	73.13
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.26	63.01
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	18.86	62.32
AT3G06270.1	Thale cress	cytosol	40.13	52.59
CDY08060	Canola	plastid	39.91	51.41
Bra001189.1-P	Field mustard	plastid	39.69	51.13
CDX74112	Canola	plastid	39.69	51.13
Bra040230.1-P	Field mustard	cytosol	36.18	50.61
CDY18847	Canola	cytosol	35.96	50.31
VIT_05s0020g02360.t01	Wine grape	cytosol	42.76	50.13
Solyc01g080400.2.1	Tomato	cytosol	42.98	47.34
PGSC0003DMT400081764	Potato	cytosol	42.76	47.1
GSMUA_Achr8P05980_001	Banana	cytosol	40.13	45.86
KRH02158	Soybean	cytosol	41.23	45.19
KRH50972	Soybean	cytosol	41.89	45.15
GSMUA_Achr10P...	Banana	mitochondrion	43.42	45.0
KRH20951	Soybean	plastid	42.11	44.55
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	42.11	44.55
GSMUA_Achr3P24900_001	Banana	cytosol	36.62	44.53
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	31.8	26.85
EES04776	Sorghum	cytosol, peroxisome, plastid	21.93	26.25
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	19.74	25.5
EER99559	Sorghum	plastid	22.59	23.9
KXG30134	Sorghum	nucleus	22.15	21.86
EES03167	Sorghum	mitochondrion	22.15	21.86
EES07864	Sorghum	cytosol, nucleus, peroxisome	20.18	19.37
KXG22794	Sorghum	cytosol, nucleus, peroxisome	21.27	19.28
EES06783	Sorghum	mitochondrion	21.27	18.58
KXG25674	Sorghum	mitochondrion	21.71	17.31
EES04932	Sorghum	cytosol, plastid	39.25	16.54

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EntrezGene:8073114	UniProt:C5X417
EnsemblPlants:EER99809	ProteinID:EER99809	ProteinID:EER99809.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353
PANTHER:PTHR24353:SF115	SMART:SM00331	SMART:SM00332	EnsemblPlantsGene:SORBI_3002G397600	SUPFAM:SSF81606	unigene:Sbi.19991
UniParc:UPI0001A83D9C	RefSeq:XP_002463288.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:74927536..74930364

Molecular Weight (calculated)

47604.7 Da

IEP (calculated)

4.787

GRAVY (calculated)

-0.114

Length

456 amino acids

Sequence
(BLAST)

001: MGCAQGKCCL PRHPRRGSSC AVGGRGDHGG ATLGRAAVPG AGLVLEYAAL AVAGLYPDSP ARESQDAHLV ATRFAGDPDL HLFAVFDGHG AAGAACAGFA
101: RDALLRLLLA SPSLAADPAA AFREAMLGAN AEMHAAPGVD DSMSGTTAVA ALVAGGALHV ANVGDSRAVA GVWRAGRVVA EDLSWDQTPF RADERARVKA
201: CGARVMSVEQ VEGMRDPEAE GWAPDEGDPP RVWARDGLYP GTAFTRSLGD LAAEAVGVVA EPEVKSVEIT PSHLFFVVAS DGVFEFLSSQ EVVDRVATYP
301: DPRDACSAIA AESYKLWLEH ENRTDDITIV IVHIRDMENS GPAGSDKADY GSVGASIAVH TIQSEIPVFV QSEASHMNRS AATGMQSPSS GSPTERSLSC
401: VAPSPTHPLL IHGRISDASK PVQSERAATQ EVQTWHQMDG GTELEWSMQQ SIPPAS

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.