Factsheet for GSMUA_Achr3P24880_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P24900_001	Banana	cytosol	57.22	82.4
GSMUA_Achr8P05980_001	Banana	cytosol	41.67	56.39
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.7	46.12
AT3G06270.1	Thale cress	cytosol	29.26	45.4
CDY08060	Canola	plastid	28.52	43.5
Bra040230.1-P	Field mustard	cytosol	26.11	43.25
CDY18847	Canola	cytosol	25.93	42.94
CDX74112	Canola	plastid	28.15	42.94
Bra001189.1-P	Field mustard	plastid	27.96	42.66
VIT_05s0020g02360.t01	Wine grape	cytosol	29.44	40.87
Solyc01g080400.2.1	Tomato	cytosol	31.3	40.82
GSMUA_Achr10P...	Banana	mitochondrion	32.96	40.45
PGSC0003DMT400081764	Potato	cytosol	30.93	40.34
Os07t0646100-00	Rice	plasma membrane	27.41	39.57
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	31.48	39.44
KRH02158	Soybean	cytosol	30.37	39.42
KRH20951	Soybean	plastid	31.3	39.21
KRH50972	Soybean	cytosol	30.37	38.77
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	9.07	35.51
TraesCS2D01G144500.3	Wheat	cytosol	27.22	31.89
EER99809	Sorghum	plastid	26.85	31.8
Zm00001d007050_P001	Maize	mitochondrion	26.48	31.5
TraesCS2B01G166100.3	Wheat	cytosol	27.22	31.48
Zm00001d022347_P001	Maize	mitochondrion	26.67	31.17
TraesCS2A01G141100.2	Wheat	cytosol	27.04	31.13
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	16.48	25.43
GSMUA_Achr11P...	Banana	mitochondrion	15.93	25.15
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	6.67	25.0
GSMUA_Achr7P09260_001	Banana	nucleus	15.37	24.92
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	14.44	24.84
GSMUA_Achr6P27920_001	Banana	mitochondrion	16.48	22.94
GSMUA_Achr8P28420_001	Banana	plastid	17.41	22.82
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	14.63	22.57
GSMUA_Achr9P07440_001	Banana	nucleus	17.04	22.55
GSMUA_Achr9P01810_001	Banana	plastid	18.15	22.53
GSMUA_Achr9P24510_001	Banana	plastid	16.85	21.67
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	16.67	21.38
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	4.81	20.97
GSMUA_Achr8P17470_001	Banana	plastid	17.78	20.56
GSMUA_Achr3P04090_001	Banana	plastid	16.67	19.74
GSMUA_Achr5P22360_001	Banana	plastid	17.04	19.66
GSMUA_Achr10P...	Banana	cytosol	27.04	14.26

Protein Annotations

KEGG:00620+2.7.9.1	KEGG:00710+2.7.9.1	KEGG:00720+2.7.9.1	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.20.20.60
MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006090
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016310
GO:GO:0016740	GO:GO:0016772	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
GO:GO:0050242	EnsemblPlantsGene:GSMUA_Achr3G24880_001	EnsemblPlants:GSMUA_Achr3P24880_001	EnsemblPlants:GSMUA_Achr3T24880_001	InterPro:IPR001932	InterPro:IPR036457
UniProt:M0SHK4	InterPro:PEP_util_C	InterPro:PEP_util_CS	PFAM:PF00481	PFAM:PF02896	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS00742	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR22931
PANTHER:PTHR22931:SF9	InterPro:Pyruvate_phosphate_dikinase	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SMART:SM00332	SUPFAM:SSF51621	SUPFAM:SSF81606
UniParc:UPI000295776E	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G24880_001]

Coordinates

chr3:+:25272352..25274430

Molecular Weight (calculated)

59643.6 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.195

Length

540 amino acids

Sequence
(BLAST)

001: MACVHVECFG HYKKWCRCRC RCNCCVHCHA THAAADPSRV HEYGPSIAPP HRVRHVLSGA SLGSSAVPCA GLRPQYSSLT QRGYYPGWPD RANEDSFCVK
101: TQFQGNPDLH FFGVFDGHGD FSAQCSAFVR DRLTDILAGD PRLWENTTEA YRSAFAATNM ALHDSEIDDS SSGTTAVTVL VRGDTLVVAN VGDSWVVAGV
201: WDGDCVVAED LSSDHKPLWE DERERLRQYG AMVSGEEDPN ARSWSDDEET YRPDPPRLWV RDFGLALSRS FGDSDLESVG LIAVPELKVV KLTANHSFFV
301: VASNGVFDFL SSQAMAGGIE KLSEVNPMLG FRGCRLGISY PELTKMQARA IFEAAISMSN QGVKVLPEIM EFEHQVSLIR TVAQQVFTEM GTSISYKVGT
401: MIEVPRAALV ADEISVQAEF FSFGTNDLTQ MTFGYSRDDV RKFLPIYLSK GILQNDPFEV LDQKGVGQLI KIAAERGRRA RPDLKVSGIY VRSCSTEEEV
501: LVGCMVLELK AKLTSQQCLF EFTQHRGGGL SRMYGARAEG

Best Arabidopsis Sequence Match ( AT4G15530.4 )
(BLAST)

001: MTSMIVKTTP ELFKGNGVFR TDHLGENRMV SRSNRLGDGS NRFPRTGTIH CQRLSIAKTG LHRETKARAI LSPVSDPAAS IAQKRVFTFG KGRSEGNKGM
101: KSLLGGKGAN LAEMASIGLS VPPGLTISTE ACQQYQIAGK KLPEGLWEEI LEGLSFIERD IGASLADPSK PLLLSVRSGA AISMPGMMDT VLNLGLNDQV
201: VVGLAAKSGE RFAYDSFRRF LDMFGDVVMG IPHAKFEEKL ERMKERKGVK NDTDLSAADL KELVEQYKSV YLEAKGQEFP SDPKKQLELA IEAVFDSWDS
301: PRANKYRSIN QITGLKGTAV NIQCMVFGNM GDTSGTGVLF TRNPSTGEKK LYGEFLVNAQ GEDVVAGIRT PEDLDTMKRF MPEAYAELVE NCNILERHYK
401: DMMDIEFTVQ EERLWMLQCR AGKRTGKGAV KIAVDMVGEG LVEKSSAIKM VEPQHLDQLL HPQFHDPSGY REKVVAKGLP ASPGAAVGQV VFTAEEAEAW
501: HSQGKTVILV RTETSPDDVG GMHAAEGILT ARGGMTSHAA VVARGWGKCC IAGCSEIRVD ENHKVLLIGD LTINEGEWIS MNGSTGEVIL GKQALAPPAL
601: SPDLETFMSW ADAIRRLKVM ANADTPEDAI AARKNGAQGI GLCRTEHMFF GADRIKAVRK MIMAVTTEQR KASLDILLPY QRSDFEGIFR AMDGLPVTIR
701: LLDPPLHEFL PEGDLDNIVH ELAEETGVKE DEVLSRIEKL SEVNPMLGFR GCRLGISYPE LTEMQARAIF EAAASMQDQG VTVIPEIMVP LVGTPQELGH
801: QVDVIRKVAK KVFAEKGHTV SYKVGTMIEI PRAALIADEI AKEAEFFSFG TNDLTQMTFG YSRDDVGKFL PIYLAKGILQ HDPFEVLDQQ GVGQLIKMAT
901: EKGRAARPSL KVGICGEHGG DPSSVGFFAE AGLDYVSCSP FRVPIARLAA AQVVVA

Arabidopsis Description

PPDKPyruvate, phosphate dikinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23404]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.