CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	97.45	97.45
KRH50972	Soybean	cytosol	75.87	77.31
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	24.13	75.36
KRH02158	Soybean	cytosol	72.39	75.0
VIT_05s0020g02360.t01	Wine grape	cytosol	66.13	73.26
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.66	72.15
AT3G06270.1	Thale cress	cytosol	58.24	72.13
CDY08060	Canola	plastid	57.77	70.34
Bra001189.1-P	Field mustard	plastid	57.31	69.77
CDX74112	Canola	plastid	57.31	69.77
Bra040230.1-P	Field mustard	cytosol	52.2	69.02
CDY18847	Canola	cytosol	51.97	68.71
Solyc01g080400.2.1	Tomato	cytosol	65.2	67.87
PGSC0003DMT400081764	Potato	cytosol	64.73	67.39
GSMUA_Achr10P...	Banana	mitochondrion	57.77	56.59
GSMUA_Achr8P05980_001	Banana	cytosol	50.12	54.14
GSMUA_Achr3P24900_001	Banana	cytosol	45.24	52.0
Os07t0646100-00	Rice	plasma membrane	43.16	49.73
TraesCS2D01G144500.3	Wheat	cytosol	46.17	43.17
TraesCS2B01G166100.3	Wheat	cytosol	45.94	42.4
EER99809	Sorghum	plastid	44.55	42.11
TraesCS2A01G141100.2	Wheat	cytosol	45.71	42.0
Zm00001d007050_P001	Maize	mitochondrion	43.85	41.63
Zm00001d022347_P001	Maize	mitochondrion	44.32	41.34
KRH36356	Soybean	cytosol	15.31	31.73
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	39.21	31.3
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	11.14	28.07
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	18.56	27.59
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	21.81	27.33
KRH33864	Soybean	nucleus	22.27	26.09
KRG92929	Soybean	nucleus	22.04	25.89
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	22.27	25.88
KRH50799	Soybean	cytosol	21.81	25.61
KRG93121	Soybean	plastid	21.58	25.48
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	21.81	25.47
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	20.19	25.36
KRH45219	Soybean	vacuole	5.57	25.26
KRH15511	Soybean	cytosol, nucleus, peroxisome	13.92	25.21
KRH02293	Soybean	cytosol	21.35	24.47
KRH65540	Soybean	cytosol	11.6	24.39
KRH65575	Soybean	cytosol	6.03	23.64
KRH65533	Soybean	cytosol	10.9	22.27
KRH25524	Soybean	nucleus	24.13	22.08
KRH00350	Soybean	cytosol, peroxisome, plastid	21.35	21.7
KRH56012	Soybean	nucleus	23.67	21.66
KRH22416	Soybean	nucleus, plastid	23.67	21.47
KRH00931	Soybean	plastid	24.13	21.36
KRH01535	Soybean	cytosol	22.51	21.32
KRH26917	Soybean	cytosol, plastid	23.43	21.31
KRH40835	Soybean	nucleus, peroxisome, plastid	21.35	21.2
KRH65545	Soybean	cytosol, peroxisome, plastid	10.9	21.17
KRH40292	Soybean	plastid	23.9	21.06
KRH39350	Soybean	cytosol	51.51	20.65
KRH76332	Soybean	cytosol	51.04	20.07
KRH45222	Soybean	nucleus	6.5	12.07

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100817563	Gene3D:3.60.40.10	MapMan:35.1	EMBL:ACUP02008331
EnsemblPlantsGene:GLYMA_13G211800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:K7M0Y6	EnsemblPlants:KRH20951
ProteinID:KRH20951	ProteinID:KRH20951.1	PFAM:PF00481	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353	PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000233BF25	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:32552265..32556704

Molecular Weight (calculated)

46933.8 Da

IEP (calculated)

4.957

GRAVY (calculated)

-0.270

Length

431 amino acids

Sequence
(BLAST)

001: MGCVHGKCCT RYPSPSVSGS RDFRELGPYC AQRKHILTQS LLQFVPVPSH NFTLEYSVLT QRGYYPDSPD KENQDSFSIR TQFQGNPSVH FFGVYDGHGE
101: FGGQCSNFVK DRLVENLSSD IALLEDPVKA YTSAFLTTND DLHKNEIDDS LSGTTAITVL VIGNTLYVAN VGDSRAVLAV KDGNRVVAED LSSDQTPFRR
201: DEYERVKLCG ARVLSVDQVE GHKDPDIQTW GDEESQGDDP PRLWVQNGMV PGAAFTRSVG DKLAETIGVI AVPEVSTVQL TPNHLFFVVA SDGVFEFLSS
301: QTVVDMAASY SDPRDACAAI AGESYKLWLE HEGRTDDITI IIVQIKGLSN SVTSGHGASE INVSTVTRTK SKRVKGASEI SATTGLDVYR SVRNGFSDLQ
401: SCPQHVVSTR SPAIVVPSPA CQTPVELVQS R

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.