Factsheet for Bra001189.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74112	Canola	plastid	98.87	98.87
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	35.03	89.86
AT3G06270.1	Thale cress	cytosol	86.44	87.93
Bra040230.1-P	Field mustard	cytosol	79.38	86.2
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.66	68.95
VIT_05s0020g02360.t01	Wine grape	cytosol	71.19	64.78
Solyc01g080400.2.1	Tomato	cytosol	69.21	59.18
PGSC0003DMT400081764	Potato	cytosol	68.64	58.7
KRH50972	Soybean	cytosol	69.49	58.16
KRH02158	Soybean	cytosol	68.08	57.93
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	70.06	57.54
KRH20951	Soybean	plastid	69.77	57.31
GSMUA_Achr10P...	Banana	mitochondrion	63.56	51.14
GSMUA_Achr8P05980_001	Banana	cytosol	55.08	48.87
Os07t0646100-00	Rice	plasma membrane	50.56	47.86
GSMUA_Achr3P24900_001	Banana	cytosol	49.44	46.67
TraesCS2D01G144500.3	Wheat	cytosol	52.54	40.35
Zm00001d007050_P001	Maize	mitochondrion	51.13	39.87
TraesCS2B01G166100.3	Wheat	cytosol	52.54	39.83
Zm00001d022347_P001	Maize	mitochondrion	51.98	39.83
EER99809	Sorghum	plastid	51.13	39.69
TraesCS2A01G141100.2	Wheat	cytosol	52.54	39.66
Bra009875.1-P	Field mustard	cytosol	27.12	28.4
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	42.66	27.96
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	26.55	27.01
Bra034542.1-P	Field mustard	cytosol	24.58	26.69
Bra037033.1-P	Field mustard	cytosol	23.73	25.77
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	25.71	25.21
Bra020569.1-P	Field mustard	nucleus	26.27	24.8
Bra036606.1-P	Field mustard	nucleus	25.71	24.4
Bra021202.1-P	Field mustard	nucleus	23.16	23.36
Bra022179.1-P	Field mustard	nucleus	22.6	22.79
Bra040822.1-P	Field mustard	cytosol	57.91	21.22
Bra033411.1-P	Field mustard	mitochondrion	24.58	20.57
Bra021414.1-P	Field mustard	plastid	25.71	19.49
Bra040598.1-P	Field mustard	plastid	24.86	19.21
Bra035360.1-P	Field mustard	plastid	23.73	19.18
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	24.01	19.02
Bra034206.1-P	Field mustard	plastid	24.29	18.49
Bra001060.1-P	Field mustard	plastid	24.58	18.24
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	22.6	16.6
Bra035131.1-P	Field mustard	nucleus	22.6	16.43
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	5.93	14.38

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra001189	EnsemblPlants:Bra001189.1
EnsemblPlants:Bra001189.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4CAG0	PFAM:PF00481
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353
PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002540AAE	SEG:seg	:

Description

AT3G06270 (E=1e-167) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA03:+:15217295..15218445

Molecular Weight (calculated)

38625.1 Da

IEP (calculated)

4.599

GRAVY (calculated)

-0.360

Length

354 amino acids

Sequence
(BLAST)

001: MGCVQCKCCS RYPSSSSEAA SSRGHGPTSK PQNETAPKPL SSTTIHVPSP SFEMVYSVLS QRGYYPDSPD KENQDTYCIK TELQGNPNVH LFGVFDGHGV
101: FGTQCSNFVK NRVVELLSED AALLQDPEKA YKTAFLRVNE ELHNSEIDDS MSGTTAITVL VVGDKIYVAN VGDSRAVLAV KDGSHRNRIL AEDLSYDQTP
201: FRTDECERVK GCGARVLSVD QVEGLKDPSV QTWASEENEG GDPPRLWVQN GMYPGTAFTR SVGDSLAEGI GVTAEPEVSM VKLSPNHLFF VVASDGIFEF
301: LPSQAVVDMV GRYADPRDGC AAAAAESYKL WLQHENRTDD ITIIIVQIKN LSNE

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.