Factsheet for Bra035131.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87369	Canola	nucleus	98.15	97.15
CDX88554	Canola	nucleus	91.58	93.31
AT1G79630.1	Thale cress	nucleus	87.89	84.92
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	72.28	73.03
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	44.97	62.57
GSMUA_Achr3P04090_001	Banana	plastid	52.77	56.36
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	58.52	55.77
GSMUA_Achr5P22360_001	Banana	plastid	52.16	54.27
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	57.08	53.98
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	56.67	53.59
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	15.81	53.47
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	58.11	51.27
Zm00001d052852_P001	Maize	plastid	55.03	51.24
Os08t0500300-01	Rice	plasma membrane	55.85	51.22
Bra040598.1-P	Field mustard	plastid	48.05	51.09
TraesCS7A01G241800.1	Wheat	nucleus	54.83	50.95
HORVU7Hr1G049260.4	Barley	nucleus	54.41	50.86
Solyc10g005640.2.1	Tomato	nucleus	57.7	50.54
Bra021414.1-P	Field mustard	plastid	47.43	49.46
Zm00001d031329_P002	Maize	nucleus	54.62	48.81
Bra033411.1-P	Field mustard	mitochondrion	42.3	48.7
Bra001060.1-P	Field mustard	plastid	46.0	46.96
KXG25674	Sorghum	mitochondrion	55.03	46.85
Bra035360.1-P	Field mustard	plastid	42.09	46.8
TraesCS7D01G240800.1	Wheat	mitochondrion	54.83	46.43
TraesCS7B01G137400.2	Wheat	plastid	54.83	46.43
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	42.3	46.09
Bra034206.1-P	Field mustard	plastid	43.33	45.38
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	32.24	43.49
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	31.01	43.39
Bra036606.1-P	Field mustard	nucleus	31.62	41.29
Bra022179.1-P	Field mustard	nucleus	29.36	40.74
Bra009875.1-P	Field mustard	cytosol	28.13	40.53
Bra021202.1-P	Field mustard	nucleus	29.16	40.46
Bra020569.1-P	Field mustard	nucleus	30.8	40.0
Bra034542.1-P	Field mustard	cytosol	26.69	39.88
Bra037033.1-P	Field mustard	cytosol	26.28	39.26
Zm00001d008472_P001	Maize	cytosol	12.32	38.71
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	11.29	37.67
Bra001189.1-P	Field mustard	plastid	16.43	22.6
Bra040230.1-P	Field mustard	cytosol	14.37	21.47
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	5.54	19.57
Bra040822.1-P	Field mustard	cytosol	25.46	12.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra035131	EnsemblPlants:Bra035131.1
EnsemblPlants:Bra035131.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4F234	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002541DB7
SEG:seg	:	:	:	:	:

Description

AT1G79630 (E=7e-208) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA07:-:22302925..22304926

Molecular Weight (calculated)

53718.2 Da

IEP (calculated)

4.464

GRAVY (calculated)

-0.396

Length

487 amino acids

Sequence
(BLAST)

001: MGLCYSVDRT TGKEPGETSS TAELADDSSG RWRRPRDLKG GGEVEGVQEV SGRLISNGSS EIACLYTQQG KKGTNQDAML VFENFCSRDG TVFCGVFDGH
101: GPFGHMVAKK VRDTLPSTLS TQLKLTSESD QNGLVNEKGT EEDEEEAQRS ECVTTMDEQW CELNPNENID ALPEMYLPLK HALLKSCQQI DKDLKMHPTI
201: DCFCSGTTSV TLIKQGEDLV VGNIGDSRAV LATRDLDNAL VAVQLTIDLK PDLPSESARI QKCKGRVFAL QDEPEVARVW LPNSDSPGLA MARAFGDFCL
301: KDYGLISVPD INYRRLTERD QFIILASDGV WDVLSNKEAV DIIASAPSRS TAARALVDTA VRSWRIKYPT SKNDDCTVVC LFLQDSSVSN VVKDSHKEEE
401: SIESVSISNK VEEEEGEIVP VKEESIPKSC RTESKMMTTM TLAECISVAQ DDEEWSALEG LTRVNSLLSI PRFLSGELRS SSWRKWL

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.