Factsheet for Bra030536.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51389	Canola	cytosol, peroxisome, plastid	91.95	97.16
Bra033411.1-P	Field mustard	mitochondrion	80.98	85.58
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	83.89	81.17
Bra034206.1-P	Field mustard	plastid	77.18	74.19
VIT_12s0059g01820.t01	Wine grape	plastid	71.59	67.65
KRH25524	Soybean	nucleus	70.92	67.3
KRH56012	Soybean	nucleus	70.69	67.09
KRH22416	Soybean	nucleus, plastid	70.69	66.53
KRH26917	Soybean	cytosol, plastid	70.25	66.24
PGSC0003DMT400047180	Potato	plastid	69.57	65.89
Solyc07g054300.2.1	Tomato	plastid	68.23	64.62
Solyc10g008490.2.1	Tomato	plastid	67.56	64.39
PGSC0003DMT400055813	Potato	plastid	67.34	64.04
Os07t0566200-01	Rice	plasma membrane	53.47	55.97
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	53.24	55.61
EER99559	Sorghum	plastid	53.47	55.45
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	53.24	55.22
Zm00001d006614_P001	Maize	plastid	53.24	55.09
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	53.02	54.99
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	53.02	54.99
Zm00001d021817_P001	Maize	plastid	52.35	54.29
GSMUA_Achr9P24510_001	Banana	plastid	49.89	53.1
HORVU2Hr1G084080.1	Barley	cytosol, plastid	17.0	48.72
Bra040598.1-P	Field mustard	plastid	47.43	46.29
Bra021414.1-P	Field mustard	plastid	47.65	45.61
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	36.69	45.43
Bra001060.1-P	Field mustard	plastid	46.98	44.03
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	46.76	43.36
Bra035360.1-P	Field mustard	plastid	42.06	42.92
Bra035131.1-P	Field mustard	nucleus	46.09	42.3
Bra034542.1-P	Field mustard	cytosol	30.2	41.41
Bra009875.1-P	Field mustard	cytosol	31.1	41.12
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	31.77	40.8
Bra037033.1-P	Field mustard	cytosol	29.31	40.18
Bra036606.1-P	Field mustard	nucleus	33.33	39.95
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	12.75	39.04
Bra020569.1-P	Field mustard	nucleus	32.44	38.67
Bra022179.1-P	Field mustard	nucleus	28.86	36.75
Bra021202.1-P	Field mustard	nucleus	28.41	36.18
Bra001189.1-P	Field mustard	plastid	19.02	24.01
Bra040230.1-P	Field mustard	cytosol	17.0	23.31
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	6.94	22.46
Bra040822.1-P	Field mustard	cytosol	26.4	12.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra030536	EnsemblPlants:Bra030536.1
EnsemblPlants:Bra030536.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4EP16	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002545A93
SEG:seg	:	:	:	:	:

Description

AT1G03590 (E=3e-176) | catalytic/ protein serine/threonine phosphatase

Coordinates

chrA08:+:21427798..21429463

Molecular Weight (calculated)

49385.0 Da

IEP (calculated)

5.015

GRAVY (calculated)

-0.485

Length

447 amino acids

Sequence
(BLAST)

001: MGGCVSKSNE EPVYRPRLGM GCCGSKMGRR TLSGRIVSLH DLVSIPNRIT SSGKSKSSCV FTQQGRKGVN QDSMIVWEDF MSKDMTFCGV FDGHGPNGHL
101: VSRKVRESLP VRLLSFMHSI QSKQNGSASK SDSQEADEKK ESSEEDKLKL LWEEAFLKSF SAMDKELRSH PNVECFCSGS TAVTIIKQGS HLFMGNIGDS
201: RAILGSKDSN DSMVAVQLTV DLKPDLPREE ERIKQCKGRV FALEDEPEVP RVWLPFDNAP GLAMARAFGD FCVKDYGVIS IPDFSHRLLT DRDQFIVLAS
301: DGVWDVLSNE EVVEVVVSAS SRASAARLVV DSASREWKLK YPTSKMDDCA VVCLFLDGKM DSESSYYEEQ RSSSVESDES QRTEPCLQRN ATVRSSSVEN
401: NSCGNVNAET DDAEKEKATE GEQQNWSGLE GVTRVNSLVQ LPRFSGD

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.