Factsheet for Bra040230.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18847	Canola	cytosol	99.39	99.39
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	41.1	97.1
AT3G06270.1	Thale cress	cytosol	89.57	83.91
Bra001189.1-P	Field mustard	plastid	86.2	79.38
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.49	60.27
VIT_05s0020g02360.t01	Wine grape	cytosol	70.86	59.38
Solyc01g080400.2.1	Tomato	cytosol	69.94	55.07
PGSC0003DMT400081764	Potato	cytosol	69.33	54.59
KRH02158	Soybean	cytosol	68.1	53.37
KRH50972	Soybean	cytosol	69.02	53.19
KRH20951	Soybean	plastid	69.02	52.2
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	67.79	51.28
GSMUA_Achr8P05980_001	Banana	cytosol	56.44	46.12
GSMUA_Achr10P...	Banana	mitochondrion	61.66	45.68
Os07t0646100-00	Rice	plasma membrane	50.61	44.12
GSMUA_Achr3P24900_001	Banana	cytosol	48.77	42.4
TraesCS2D01G144500.3	Wheat	cytosol	51.84	36.66
TraesCS2B01G166100.3	Wheat	cytosol	51.84	36.19
EER99809	Sorghum	plastid	50.61	36.18
TraesCS2A01G141100.2	Wheat	cytosol	51.84	36.03
Zm00001d022347_P001	Maize	mitochondrion	50.92	35.93
Zm00001d007050_P001	Maize	mitochondrion	49.69	35.68
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	43.25	26.11
Bra009875.1-P	Field mustard	cytosol	24.54	23.67
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	24.54	22.99
Bra034542.1-P	Field mustard	cytosol	22.39	22.39
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	24.54	22.16
Bra037033.1-P	Field mustard	cytosol	22.09	22.09
Bra020569.1-P	Field mustard	nucleus	24.23	21.07
Bra036606.1-P	Field mustard	nucleus	23.62	20.64
Bra021202.1-P	Field mustard	nucleus	21.17	19.66
Bra040822.1-P	Field mustard	cytosol	57.06	19.25
Bra022179.1-P	Field mustard	nucleus	20.55	19.09
Bra033411.1-P	Field mustard	mitochondrion	23.93	18.44
Bra035360.1-P	Field mustard	plastid	23.31	17.35
Bra021414.1-P	Field mustard	plastid	24.85	17.34
Bra040598.1-P	Field mustard	plastid	24.23	17.25
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	23.31	17.0
Bra034206.1-P	Field mustard	plastid	23.62	16.56
Bra001060.1-P	Field mustard	plastid	23.62	16.14
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	21.47	14.52
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	6.44	14.38
Bra035131.1-P	Field mustard	nucleus	21.47	14.37

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra040230	EnsemblPlants:Bra040230.1
EnsemblPlants:Bra040230.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4FGK2	PFAM:PF00481
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353
PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002544CDC	SEG:seg	:

Description

AT3G06270 (E=1e-083) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA01:-:28239624..28240751

Molecular Weight (calculated)

35885.1 Da

IEP (calculated)

4.489

GRAVY (calculated)

-0.359

Length

326 amino acids

Sequence
(BLAST)

001: MGCVQCKCCR RYPPSSSSGD SHRRGGDAKV KPNVVVQKPP LSSSIQVPSP NFDMVYSVLS QRGYYPDSPD KENQDAYCIK TELQGNPNVH FFGVFDGHGV
101: FGTQCSSFVK ERVVEMLSED PALLQDPEKA YKSAFLRVNE ELHESEIDDS MSGTTAITVL VVGDKIYVAN TPFREDECER VKACGARVMT VDQVEGLKDP
201: NIQTWANEES EGGDPPRLWV QNGMYPGTAF TRSVGDCTAE GIGVTAEPEV SIVHLSPNHL FFVVASDGIF EFLPSQAVVD MVGRYADPRD GCAAATAESY
301: KLWLEHENRT DDITIIIVQI KNLSNE

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.