Factsheet for Bra040228.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.19	46.12
CDY18847	Canola	cytosol	97.83	41.41
Bra040230.1-P	Field mustard	cytosol	97.1	41.1
AT3G06270.1	Thale cress	cytosol	92.75	36.78
Bra001189.1-P	Field mustard	plastid	89.86	35.03
VIT_05s0020g02360.t01	Wine grape	cytosol	76.81	27.25
Solyc01g080400.2.1	Tomato	cytosol	75.36	25.12
PGSC0003DMT400081764	Potato	cytosol	74.64	24.88
KRH02158	Soybean	cytosol	73.91	24.52
KRH50972	Soybean	cytosol	74.64	24.35
KRH20951	Soybean	plastid	75.36	24.13
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	73.91	23.67
Os07t0646100-00	Rice	plasma membrane	62.32	22.99
GSMUA_Achr10P...	Banana	mitochondrion	71.01	22.27
GSMUA_Achr8P05980_001	Banana	cytosol	60.14	20.8
TraesCS2D01G144500.3	Wheat	cytosol	63.04	18.87
EER99809	Sorghum	plastid	62.32	18.86
Zm00001d022347_P001	Maize	mitochondrion	63.04	18.83
Zm00001d007050_P001	Maize	mitochondrion	61.59	18.72
TraesCS2B01G166100.3	Wheat	cytosol	63.04	18.63
TraesCS2A01G141100.2	Wheat	cytosol	63.04	18.55
GSMUA_Achr3P24900_001	Banana	cytosol	47.83	17.6
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	14.49	13.7
Bra009875.1-P	Field mustard	cytosol	24.64	10.06
Bra037033.1-P	Field mustard	cytosol	23.19	9.82
Bra034542.1-P	Field mustard	cytosol	21.74	9.2
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	35.51	9.07
Bra040822.1-P	Field mustard	cytosol	62.32	8.9
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	21.74	8.31
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	20.29	8.05
Bra033411.1-P	Field mustard	mitochondrion	24.64	8.04
Bra036606.1-P	Field mustard	nucleus	21.01	7.77
Bra020569.1-P	Field mustard	nucleus	20.29	7.47
Bra021202.1-P	Field mustard	nucleus	18.84	7.41
Bra022179.1-P	Field mustard	nucleus	18.84	7.41
Bra040598.1-P	Field mustard	plastid	23.91	7.21
Bra035360.1-P	Field mustard	plastid	22.46	7.08
Bra021414.1-P	Field mustard	plastid	23.91	7.07
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	22.46	6.94
Bra034206.1-P	Field mustard	plastid	23.19	6.88
Bra001060.1-P	Field mustard	plastid	23.19	6.71
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	19.57	5.6
Bra035131.1-P	Field mustard	nucleus	19.57	5.54

Protein Annotations

EnsemblPlants:Bra040228.1	EnsemblPlants:Bra040228.1-P	EnsemblPlantsGene:Bra040228	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR24353	PANTHER:PTHR24353:SF115	PFAM:PF00481	PFscan:PS51746	SUPFAM:SSF81606	UniParc:UPI0002544CDA
UniProt:M4FGK0	MapMan:35.1	:	:	:	:

Description

AT3G06270 (E=1e-071) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA01:-:28226212..28226721

Molecular Weight (calculated)

15297.9 Da

IEP (calculated)

4.108

GRAVY (calculated)

-0.226

Length

138 amino acids

Sequence
(BLAST)

001: MTVDQVERLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDCT AEGIGVTAEP EVSMVHLSPN HLFFVVVSDG IFEFLPSQAV VDMVGRYADP
101: RDGCAAATVE SYKLWLEHEN RTDDITIIIV QIKNLSNE

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.