Factsheet for Bra021332.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
peroxisome 1
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	45.21	38.6
CDY00978	Canola	cytosol	60.27	25.07
Bra035360.1-P	Field mustard	plastid	63.7	21.23
AT5G36250.2	Thale cress	plastid	62.33	19.7
KRH36356	Soybean	cytosol	22.6	15.87
Bra021414.1-P	Field mustard	plastid	50.68	15.85
Bra040598.1-P	Field mustard	plastid	49.32	15.72
KRH01535	Soybean	cytosol	45.89	14.73
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	13.7	14.49
Bra001060.1-P	Field mustard	plastid	47.26	14.47
Bra033411.1-P	Field mustard	mitochondrion	40.41	13.95
Bra034206.1-P	Field mustard	plastid	43.15	13.55
KRG93121	Soybean	plastid	33.56	13.42
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	39.04	12.75
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	30.82	12.47
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	40.41	12.24
Bra034542.1-P	Field mustard	cytosol	26.03	11.66
Bra035131.1-P	Field mustard	nucleus	37.67	11.29
Bra021202.1-P	Field mustard	nucleus	26.71	11.11
Bra037033.1-P	Field mustard	cytosol	24.66	11.04
Bra036606.1-P	Field mustard	nucleus	27.4	10.72
Bra020569.1-P	Field mustard	nucleus	27.4	10.67
Bra009875.1-P	Field mustard	cytosol	23.97	10.36
Bra022179.1-P	Field mustard	nucleus	24.66	10.26
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	23.97	10.06
Bra040230.1-P	Field mustard	cytosol	14.38	6.44
Bra001189.1-P	Field mustard	plastid	14.38	5.93
Bra040822.1-P	Field mustard	cytosol	20.55	3.11
KRH45222	Soybean	nucleus	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra021332	EnsemblPlants:Bra021332.1
EnsemblPlants:Bra021332.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4DXT6	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SUPFAM:SSF81606	UniParc:UPI000254506C	SEG:seg

Description

AT5G36250 (E=5e-045) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA01:+:26048618..26049181

Molecular Weight (calculated)

16207.2 Da

IEP (calculated)

4.971

GRAVY (calculated)

-0.162

Length

146 amino acids

Sequence
(BLAST)

001: MLQLVNNSSN HLFTILLYSY RRLTEKDEFV VLATDGIWDV LTNEEVVEIV AKAPTHCTAG RALVEAAVRN WRWKFRTSKV DDCAIVCLFL DSKPDKLSTA
101: SFSVDKHISN GLTEPDTTST STPGSGTESL ELKGVDRIDT IVTTKE

Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.