CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36356	Soybean	cytosol	40.0	70.19
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	27.12	57.89
CDY72270	Canola	cytosol	30.96	53.55
KRH45219	Soybean	vacuole	13.7	52.63
KRH01535	Soybean	cytosol	60.55	48.57
CDY46975	Canola	cytosol, mitochondrion, peroxisome	41.1	48.23
CDX91383	Canola	cytosol	41.37	47.19
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	42.47	45.19
CDY37649	Canola	mitochondrion, plastid	52.05	44.19
CDY70364	Canola	cytosol, peroxisome	43.56	43.92
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	41.37	43.9
CDY63003	Canola	mitochondrion, plastid	52.05	43.38
Bra035360.1-P	Field mustard	plastid	52.05	43.38
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	43.84	43.13
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	34.25	43.1
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	43.29	42.82
CDY00978	Canola	cytosol	41.1	42.73
KRH65540	Soybean	cytosol	23.84	42.44
KRH00931	Soybean	plastid	56.44	42.3
KRH40292	Soybean	plastid	55.89	41.72
KRH33864	Soybean	nucleus	41.92	41.58
AT5G36250.2	Thale cress	plastid	52.33	41.34
CDY56581	Canola	cytosol	38.36	41.18
KRG92929	Soybean	nucleus	41.37	41.14
KRH50799	Soybean	cytosol	40.55	40.33
CDX97493	Canola	cytosol	36.44	40.06
KRH02293	Soybean	cytosol	40.82	39.63
KRH45222	Soybean	nucleus	24.66	38.79
KRH56012	Soybean	nucleus	49.86	38.64
KRH25524	Soybean	nucleus	49.32	38.22
KRH65575	Soybean	cytosol	11.51	38.18
KRH65533	Soybean	cytosol	21.92	37.91
CDY34568	Canola	cytosol	14.52	37.86
KRH26917	Soybean	cytosol, plastid	48.49	37.34
KRH22416	Soybean	nucleus, plastid	48.22	37.05
KRH15511	Soybean	cytosol, nucleus, peroxisome	23.56	36.13
KRH40835	Soybean	nucleus, peroxisome, plastid	42.19	35.48
KRH00350	Soybean	cytosol, peroxisome, plastid	41.1	35.38
KRH65545	Soybean	cytosol, peroxisome, plastid	21.1	34.68
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	13.42	33.56
KRH02158	Soybean	cytosol	24.66	21.63
KRH20951	Soybean	plastid	25.48	21.58
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	25.48	21.58
KRH50972	Soybean	cytosol	24.11	20.8
KRH39350	Soybean	cytosol	25.21	8.56
KRH76332	Soybean	cytosol	24.38	8.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100816114	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EMBL:ACUP02012781
EnsemblPlantsGene:GLYMA_20G248900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1NJE2
InterPro:IPR001932	InterPro:IPR036457	ProteinID:KRG93120.1	EnsemblPlants:KRG93121	ProteinID:KRG93121	ProteinID:KRG93121.1
ProteinID:KRG93122.1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233D8DD	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:47785438..47791119

Molecular Weight (calculated)

39898.2 Da

IEP (calculated)

7.484

GRAVY (calculated)

-0.239

Length

365 amino acids

Sequence
(BLAST)

001: MGSCLSVSGA SASVDAFDES SSNSSSRTAS DYNMEMRLHR VPGRLFLNCS SQVASLFCKQ GRKGINQDAM LLWDNFSSNK DTVFCGVFDG HGPHGHMVAK
101: KLRDSFPLKL IAQWNLLHPN NNSSSNNNSD TPCAVAPGNI GTLRDSFVKA CKVMDRELKV QHQIDCSCSG STGLTLLKQG QDLVIANVGD SRAVLATQDR
201: SNGSLVAVQL STDHKPHLPR EAERIRICKG RVFSIKNESG IPRVWLPNID SPGLAMSRAF GDFCLKDFGV ISVPDFSYHR LTQRDQFVVL ATDGVWDVLS
301: NEEAVAIISS APRSSAARML VEAAIHAWKT KLPLTKVDDC SVVCLFFHSD SDSDSLRLEP QQNHQ

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.