CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15511	Soybean	cytosol, nucleus, peroxisome	59.01	85.29
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	63.66	63.85
VIT_04s0008g00740.t01	Wine grape	cytosol	61.63	60.74
PGSC0003DMT400005637	Potato	cytosol	33.72	59.49
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	13.95	57.14
Solyc08g065670.2.1	Tomato	peroxisome	48.55	54.58
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	50.87	52.08
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	49.71	51.51
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	48.26	50.15
Bra034542.1-P	Field mustard	cytosol	47.09	49.69
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	45.35	49.68
CDX80553	Canola	cytosol	48.26	49.11
CDY28276	Canola	cytosol	46.51	49.08
GSMUA_Achr7P09260_001	Banana	nucleus	47.38	48.95
CDY45023	Canola	cytosol	46.22	48.77
AT4G32950.1	Thale cress	cytosol	45.93	48.47
Bra009875.1-P	Field mustard	cytosol	46.8	47.63
CDX88210	Canola	cytosol	46.8	47.63
CDX72381	Canola	cytosol	44.77	47.24
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	48.84	46.8
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	47.97	46.61
Bra037033.1-P	Field mustard	cytosol	43.9	46.32
CDY13509	Canola	cytosol	43.9	46.32
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	48.55	46.26
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	47.97	46.22
KRH36356	Soybean	cytosol	27.33	45.19
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	26.45	44.39
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	46.8	42.71
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	47.97	42.42
EES04776	Sorghum	cytosol, peroxisome, plastid	46.8	42.26
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	20.93	42.11
KRG93121	Soybean	plastid	43.9	41.37
KRH45219	Soybean	vacuole	11.34	41.05
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	18.31	39.62
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	33.14	39.31
KRH65540	Soybean	cytosol	22.97	38.54
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	40.7	37.94
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	40.41	37.47
KRH33864	Soybean	nucleus	39.53	36.96
KRG92929	Soybean	nucleus	38.37	35.97
KRH50799	Soybean	cytosol	37.79	35.42
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	45.64	34.58
KRH01535	Soybean	cytosol	45.64	34.51
KRH02293	Soybean	cytosol	37.21	34.04
KRH65533	Soybean	cytosol	20.64	33.65
KRH00350	Soybean	cytosol, peroxisome, plastid	41.28	33.49
KRH40835	Soybean	nucleus, peroxisome, plastid	42.15	33.41
KRH65575	Soybean	cytosol	10.47	32.73
KRH26917	Soybean	cytosol, plastid	44.48	32.28
KRH00931	Soybean	plastid	45.64	32.24
KRH40292	Soybean	plastid	45.64	32.11
KRH22416	Soybean	nucleus, plastid	43.9	31.79
KRH56012	Soybean	nucleus	43.31	31.63
KRH65545	Soybean	cytosol, peroxisome, plastid	20.35	31.53
KRH25524	Soybean	nucleus	42.73	31.21
KRH20951	Soybean	plastid	27.33	21.81
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	27.03	21.58
KRH45222	Soybean	nucleus	14.53	21.55
KRH50972	Soybean	cytosol	26.16	21.28
KRH02158	Soybean	cytosol	25.58	21.15
KRH39350	Soybean	cytosol	27.62	8.84
KRH76332	Soybean	cytosol	27.33	8.58

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100815312	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EMBL:ACUP02010746
EnsemblPlantsGene:GLYMA_17G230600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1MXD3
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KRH05503	ProteinID:KRH05503	ProteinID:KRH05503.1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233E38D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:38566124..38570491

Molecular Weight (calculated)

37629.5 Da

IEP (calculated)

4.848

GRAVY (calculated)

-0.240

Length

344 amino acids

Sequence
(BLAST)

001: MGICISVAEE AHDDDNVTIF EARKVLNGSQ RLCSVYSKQG SKGLNQDAAS VHEGYGMEDG TFCGVYDGHG GNGHKVSKIV SSRLSSLILD QKNVLERIDE
101: IENGYNNTTK KHVNSVKEEL PARNFQKWKE AIVSAFKVMD KEVKLQKNLD CFSSGTTAVV IIKQGEGLVI ANLGDSRAVL GTIYDEKLVA IQLTTDLKPE
201: LPREAERIRR CNGCVCGSNE EPDIQRVWMP NNENSPGLAM SRSLGDFLLK DHGVIAIPDV SYHPLTSTDQ FIVLASDGVW DVLSNNEVAS IVWSVDSEEA
301: AAMAVVEAAT AAWNEKYPSY MADDCTVVCL FLHKKSQLTN LSAP

Best Arabidopsis Sequence Match ( AT5G26010.1 )
(BLAST)

001: MGHCFSLPSS QSEIHEDNEH GDGNVVCYGE EFGLDQDLPV HRLGSVCSIQ GTKVLNQDHA VLYQGYGTRD TELCGVFDGH GKNGHMVSKM VRNRLPSVLL
101: ALKEELNQES NVCEEEASKW EKACFTAFRL IDRELNLQVF NCSFSGSTGV VAITQGDDLV IANLGDSRAV LGTMTEDGEI KAVQLTSDLT PDVPSEAERI
201: RMCKGRVFAM KTEPSSQRVW LPNQNIPGLA MSRAFGDFRL KDHGVIAVPE ISQHRITSKD QFLVLATDGV WDMLSNDEVV SLIWSSGKKQ ASAAKMVAEA
301: AEAAWKKRLK YTKVDDITVI CLFLQNKEQP S

Arabidopsis Description

Probable protein phosphatase 2C 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.