CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65540	Soybean	cytosol	61.03	86.34
KRH65533	Soybean	cytosol	56.9	78.2
KRH65545	Soybean	cytosol, peroxisome, plastid	56.9	74.32
KRH45219	Soybean	vacuole	15.52	47.37
KRH00350	Soybean	cytosol, peroxisome, plastid	66.9	45.75
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	26.55	45.03
KRH40835	Soybean	nucleus, peroxisome, plastid	67.24	44.93
KRH36356	Soybean	cytosol	31.03	43.27
KRH65575	Soybean	cytosol	15.86	41.82
VIT_08s0058g00660.t01	Wine grape	cytosol	53.79	39.59
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	48.97	39.34
CDY40298	Canola	cytosol, peroxisome, plastid	48.97	39.34
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	48.62	36.91
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	48.97	36.88
Solyc10g076320.1.1	Tomato	nucleus	52.41	34.86
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	51.03	34.5
TraesCS5A01G150700.1	Wheat	cytosol	50.69	34.43
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	49.66	34.29
KRG93121	Soybean	plastid	43.1	34.25
TraesCS5D01G155800.1	Wheat	cytosol	50.34	34.19
TraesCS5B01G149300.1	Wheat	cytosol	50.34	34.19
PGSC0003DMT400030965	Potato	nucleus	52.07	33.93
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	48.97	33.73
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	39.66	33.53
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	42.41	33.15
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	39.31	33.14
KRH33864	Soybean	nucleus	41.72	32.88
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	41.72	32.79
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	51.03	32.53
PGSC0003DMT400028836	Potato	nucleus	50.69	32.52
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	50.69	32.45
KRG92929	Soybean	nucleus	41.03	32.43
KRH50799	Soybean	cytosol	40.0	31.61
KRH02293	Soybean	cytosol	40.69	31.38
KRH01535	Soybean	cytosol	48.97	31.21
KRH00931	Soybean	plastid	51.03	30.39
KRH40292	Soybean	plastid	50.69	30.06
KRH56012	Soybean	nucleus	47.59	29.3
Zm00001d005071_P001	Maize	cytosol	47.59	29.18
KRH25524	Soybean	nucleus	47.24	29.09
EES07864	Sorghum	cytosol, nucleus, peroxisome	47.24	28.84
KRH26917	Soybean	cytosol, plastid	46.21	28.27
KRH22416	Soybean	nucleus, plastid	45.86	28.0
KXG22794	Sorghum	cytosol, nucleus, peroxisome	47.59	27.44
KRH15511	Soybean	cytosol, nucleus, peroxisome	19.31	23.53
KRH02158	Soybean	cytosol	26.9	18.75
KRH50972	Soybean	cytosol	27.24	18.68
KRH20951	Soybean	plastid	27.59	18.56
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	27.59	18.56
KRH45222	Soybean	nucleus	11.03	13.79
KRH39350	Soybean	cytosol	26.9	7.26
KRH76332	Soybean	cytosol	26.55	7.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	UniProt:A0A0R0LFV7	EMBL:ACUP02000551
EnsemblPlantsGene:GLYMA_01G127600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH76051	ProteinID:KRH76051	ProteinID:KRH76051.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF199	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0003DEC51A	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:43941202..43943538

Molecular Weight (calculated)

32194.5 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.267

Length

290 amino acids

Sequence
(BLAST)

001: MLSMIHYQDF TGKKDMIFCG VFDGHGPLGH KLSQCIRDNL PAKLSASIKQ SQEKAMKHYD ANATNGGSHS DDYVEDNQNM SFPSWEGTFM RCFSEIDEKF
101: AKNIDTDGFR GGSTAVTVIK QGDQLIIGNV GDSRAVLCRR APDNRLIPVQ LTVDLTPDIP REALRIINCG GRIFATEEDP SVNRVWMPKG DCPGLAMARA
201: FGNFCLKDYG VTSIPDVSYR KLTKQDEFVV LASDGIWDML SNSEVINIVA SAPKRSMAAK LLVNHAVRAW RYKHGFKVDD CSAICLFLKD

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.