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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400030965 Potato nucleus 97.02 95.06
Solyc10g085370.1.1 Tomato cytosol, nucleus, peroxisome 69.04 66.45
KRH76051 Soybean cytoskeleton, cytosol, peroxisome 34.86 52.41
CDY40298 Canola cytosol, peroxisome, plastid 43.35 52.35
KRH65540 Soybean cytosol 24.54 52.2
Bra009643.1-P Field mustard cytosol, peroxisome, plastid 42.89 51.8
VIT_08s0058g00660.t01 Wine grape cytosol 45.64 50.51
KRH40835 Soybean nucleus, peroxisome, plastid 49.77 50.0
KRH00350 Soybean cytosol, peroxisome, plastid 48.17 49.53
AT5G01700.2 Thale cress cytosol, peroxisome, plastid 42.89 48.95
KRH65575 Soybean cytosol 11.93 47.27
KRH65533 Soybean cytosol 22.02 45.5
Os11t0109000-01 Rice cytosol, peroxisome, plastid 42.89 44.52
Solyc04g056560.2.1 Tomato cytosol 40.6 44.14
GSMUA_Achr7P22300_001 Banana cytosol, peroxisome, plastid 42.43 43.94
TraesCS5B01G149300.1 Wheat cytosol 42.89 43.79
TraesCS5A01G150700.1 Wheat cytosol 42.66 43.56
TraesCS5D01G155800.1 Wheat cytosol 42.43 43.33
KRH65545 Soybean cytosol, peroxisome, plastid 22.02 43.24
HORVU5Hr1G047410.12 Barley cytosol, peroxisome, plastid 42.43 43.12
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 38.07 43.12
Solyc08g065670.2.1 Tomato peroxisome 30.05 42.81
Solyc01g065700.2.1 Tomato nucleus 34.4 41.55
Os12t0108600-00 Rice cytosol, peroxisome, plastid 43.35 41.54
Solyc08g065500.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 31.65 41.07
Solyc05g055790.2.1 Tomato plastid 44.27 41.06
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 33.49 39.78
EES07864 Sorghum cytosol, nucleus, peroxisome 42.66 39.16
Solyc08g065540.2.1 Tomato cytosol, nucleus, peroxisome 29.82 39.16
Solyc10g008490.2.1 Tomato plastid 41.97 39.02
Zm00001d005071_P001 Maize cytosol 41.97 38.69
Solyc07g054300.2.1 Tomato plastid 40.83 37.71
KXG22794 Sorghum cytosol, nucleus, peroxisome 42.89 37.18
Solyc07g066260.2.1 Tomato cytosol, nucleus, peroxisome 41.51 35.15
Solyc08g065680.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 15.83 33.66
Solyc10g005640.2.1 Tomato nucleus 41.74 32.73
Solyc01g080400.2.1 Tomato cytosol 21.33 22.46
Solyc05g018300.2.1 Tomato cytosol 24.31 9.81
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004722GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:IPR001932InterPro:IPR036457UniProt:K4D1X4PFAM:PF00481
InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF199
SMART:SM00332SUPFAM:SSF81606EnsemblPlantsGene:Solyc10g076320.1EnsemblPlants:Solyc10g076320.1.1UniParc:UPI0002769C02SEG:seg
Description
No Description!
Coordinates
chr10:+:59240241..59243347
Molecular Weight (calculated)
49132.1 Da
IEP (calculated)
6.962
GRAVY (calculated)
-0.575
Length
436 amino acids
Sequence
(BLAST)
001: MGACCTCQRG HKLEGKNHHK NHHSYFEEKN NNNGEHKEGD DDYQSIVGRG DLGANIRLCG FSKFVSMYSQ QGKKGINQDA MTVWENFGGQ KGMIFCGVFD
101: GHGPSGHKVA RYVRDTLPSK LSSSNVISAN RWDAEKDDES NNPVFDAWKD KFIMSFKEMD EELEGDGSIE SYCSGTTAVT LVKQGEHLIV GNLGDSRAII
201: CTRDDKNELV AKQLTVDLKP NLPAEYERIK SCEGRVMAME EEPNIYRVWM PDQDCPGLAM ARAFGDFCLK DFGLISVPEV YYRKLTEKDE FIVLASDGLW
301: DVLSNNEVIR IVASARKRSI AARLVVHHAV RAWKYKYPCA KVDDCAVVCL FLKRQKPLLT KSLSEVTELS LNYSEIATSK NYSPNSKIDD GLDTLLNYQV
401: KEEKDPNVAT GLYDDHKKSS SRHARYLSRR KSTVNF
Best Arabidopsis Sequence Match ( AT5G01700.2 )
(BLAST)
001: MGVCCSKGTG IIVEHGADDG NECGDGEAEV RDTNDGAVVR TRGSSKHVSM SIKQGKKGIN QDAMTVWENF GGEEDTIFCG VFDGHGPMGH KISRHVCENL
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS
Arabidopsis Description
Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.