Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400030965 | Potato | nucleus | 97.02 | 95.06 |
Solyc10g085370.1.1 | Tomato | cytosol, nucleus, peroxisome | 69.04 | 66.45 |
KRH76051 | Soybean | cytoskeleton, cytosol, peroxisome | 34.86 | 52.41 |
CDY40298 | Canola | cytosol, peroxisome, plastid | 43.35 | 52.35 |
KRH65540 | Soybean | cytosol | 24.54 | 52.2 |
Bra009643.1-P | Field mustard | cytosol, peroxisome, plastid | 42.89 | 51.8 |
VIT_08s0058g00660.t01 | Wine grape | cytosol | 45.64 | 50.51 |
KRH40835 | Soybean | nucleus, peroxisome, plastid | 49.77 | 50.0 |
KRH00350 | Soybean | cytosol, peroxisome, plastid | 48.17 | 49.53 |
AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 42.89 | 48.95 |
KRH65575 | Soybean | cytosol | 11.93 | 47.27 |
KRH65533 | Soybean | cytosol | 22.02 | 45.5 |
Os11t0109000-01 | Rice | cytosol, peroxisome, plastid | 42.89 | 44.52 |
Solyc04g056560.2.1 | Tomato | cytosol | 40.6 | 44.14 |
GSMUA_Achr7P22300_001 | Banana | cytosol, peroxisome, plastid | 42.43 | 43.94 |
TraesCS5B01G149300.1 | Wheat | cytosol | 42.89 | 43.79 |
TraesCS5A01G150700.1 | Wheat | cytosol | 42.66 | 43.56 |
TraesCS5D01G155800.1 | Wheat | cytosol | 42.43 | 43.33 |
KRH65545 | Soybean | cytosol, peroxisome, plastid | 22.02 | 43.24 |
HORVU5Hr1G047410.12 | Barley | cytosol, peroxisome, plastid | 42.43 | 43.12 |
CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 38.07 | 43.12 |
Solyc08g065670.2.1 | Tomato | peroxisome | 30.05 | 42.81 |
Solyc01g065700.2.1 | Tomato | nucleus | 34.4 | 41.55 |
Os12t0108600-00 | Rice | cytosol, peroxisome, plastid | 43.35 | 41.54 |
Solyc08g065500.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 31.65 | 41.07 |
Solyc05g055790.2.1 | Tomato | plastid | 44.27 | 41.06 |
Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 33.49 | 39.78 |
EES07864 | Sorghum | cytosol, nucleus, peroxisome | 42.66 | 39.16 |
Solyc08g065540.2.1 | Tomato | cytosol, nucleus, peroxisome | 29.82 | 39.16 |
Solyc10g008490.2.1 | Tomato | plastid | 41.97 | 39.02 |
Zm00001d005071_P001 | Maize | cytosol | 41.97 | 38.69 |
Solyc07g054300.2.1 | Tomato | plastid | 40.83 | 37.71 |
KXG22794 | Sorghum | cytosol, nucleus, peroxisome | 42.89 | 37.18 |
Solyc07g066260.2.1 | Tomato | cytosol, nucleus, peroxisome | 41.51 | 35.15 |
Solyc08g065680.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 15.83 | 33.66 |
Solyc10g005640.2.1 | Tomato | nucleus | 41.74 | 32.73 |
Solyc01g080400.2.1 | Tomato | cytosol | 21.33 | 22.46 |
Solyc05g018300.2.1 | Tomato | cytosol | 24.31 | 9.81 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K4D1X4 | PFAM:PF00481 |
InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF199 |
SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:Solyc10g076320.1 | EnsemblPlants:Solyc10g076320.1.1 | UniParc:UPI0002769C02 | SEG:seg |
Description
No Description!
Coordinates
chr10:+:59240241..59243347
Molecular Weight (calculated)
49132.1 Da
IEP (calculated)
6.962
GRAVY (calculated)
-0.575
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACCTCQRG HKLEGKNHHK NHHSYFEEKN NNNGEHKEGD DDYQSIVGRG DLGANIRLCG FSKFVSMYSQ QGKKGINQDA MTVWENFGGQ KGMIFCGVFD
101: GHGPSGHKVA RYVRDTLPSK LSSSNVISAN RWDAEKDDES NNPVFDAWKD KFIMSFKEMD EELEGDGSIE SYCSGTTAVT LVKQGEHLIV GNLGDSRAII
201: CTRDDKNELV AKQLTVDLKP NLPAEYERIK SCEGRVMAME EEPNIYRVWM PDQDCPGLAM ARAFGDFCLK DFGLISVPEV YYRKLTEKDE FIVLASDGLW
301: DVLSNNEVIR IVASARKRSI AARLVVHHAV RAWKYKYPCA KVDDCAVVCL FLKRQKPLLT KSLSEVTELS LNYSEIATSK NYSPNSKIDD GLDTLLNYQV
401: KEEKDPNVAT GLYDDHKKSS SRHARYLSRR KSTVNF
101: GHGPSGHKVA RYVRDTLPSK LSSSNVISAN RWDAEKDDES NNPVFDAWKD KFIMSFKEMD EELEGDGSIE SYCSGTTAVT LVKQGEHLIV GNLGDSRAII
201: CTRDDKNELV AKQLTVDLKP NLPAEYERIK SCEGRVMAME EEPNIYRVWM PDQDCPGLAM ARAFGDFCLK DFGLISVPEV YYRKLTEKDE FIVLASDGLW
301: DVLSNNEVIR IVASARKRSI AARLVVHHAV RAWKYKYPCA KVDDCAVVCL FLKRQKPLLT KSLSEVTELS LNYSEIATSK NYSPNSKIDD GLDTLLNYQV
401: KEEKDPNVAT GLYDDHKKSS SRHARYLSRR KSTVNF
001: MGVCCSKGTG IIVEHGADDG NECGDGEAEV RDTNDGAVVR TRGSSKHVSM SIKQGKKGIN QDAMTVWENF GGEEDTIFCG VFDGHGPMGH KISRHVCENL
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS
Arabidopsis Description
Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.