Factsheet for Solyc01g065700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015950	Potato	plastid	94.46	95.25
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	59.28	61.14
GSMUA_Achr11P...	Banana	mitochondrion	57.34	60.53
KRH50799	Soybean	cytosol	59.56	58.58
KRH02293	Soybean	cytosol	59.83	57.45
Bra021202.1-P	Field mustard	nucleus	55.12	56.7
CDY50503	Canola	nucleus	55.12	56.7
CDY67911	Canola	nucleus	55.12	56.7
TraesCS1A01G228100.1	Wheat	mitochondrion	52.63	56.21
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	57.06	56.13
VIT_05s0077g01820.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	62.33	55.97
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	52.35	55.59
AT3G16800.2	Thale cress	nucleus	53.74	55.27
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	34.63	55.07
TraesCS1B01G242300.1	Wheat	mitochondrion	51.52	54.87
Bra022179.1-P	Field mustard	nucleus	53.19	54.7
CDX95903	Canola	nucleus	52.63	54.13
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	52.63	53.82
TraesCS1B01G242200.1	Wheat	mitochondrion	50.42	53.69
CDX92097	Canola	nucleus	52.08	53.56
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	52.08	53.41
Os05t0358500-01	Rice	mitochondrion	51.52	52.69
Zm00001d037949_P001	Maize	mitochondrion	51.25	52.41
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	51.8	50.82
TraesCS1D01G229700.1	Wheat	mitochondrion	51.8	50.82
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	52.35	50.67
TraesCS1D01G229600.2	Wheat	mitochondrion	50.14	49.32
HORVU1Hr1G059130.3	Barley	mitochondrion	50.69	48.54
TraesCS1A01G228200.1	Wheat	mitochondrion	45.15	42.34
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	29.64	40.23
Solyc08g065670.2.1	Tomato	peroxisome	32.41	38.24
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	36.57	37.71
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	33.8	36.75
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	34.07	36.61
Solyc04g056560.2.1	Tomato	cytosol	39.34	35.41
Solyc10g076320.1.1	Tomato	nucleus	41.55	34.4
Solyc05g055790.2.1	Tomato	plastid	44.6	34.26
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	40.44	32.23
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	17.73	31.22
Solyc10g008490.2.1	Tomato	plastid	39.34	30.28
Solyc07g054300.2.1	Tomato	plastid	38.23	29.24
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	41.55	29.13
Solyc10g005640.2.1	Tomato	nucleus	41.55	26.98
Solyc01g080400.2.1	Tomato	cytosol	24.65	21.5
Solyc05g018300.2.1	Tomato	cytosol	24.1	8.06

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0000226	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009819	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	GO:GO:0045926	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4AWH4	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF310
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc01g065700.2	EnsemblPlants:Solyc01g065700.2.1	UniParc:UPI0002762748	:

Description

No Description!

Coordinates

chr1:-:72290432..72294310

Molecular Weight (calculated)

39994.6 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.266

Length

361 amino acids

Sequence
(BLAST)

001: MVQFSSIFTG ITKSIAIRNG KKSKHDDGRE TADALAKEAK KNEMMLTSSG SVAGASHNLA VVFSKGGKKG INQDRFVVWE DFGCQDDMIF CGVFDGHGPW
101: GHLVAKRVRK LMPTALLRNW QKRVAHTVDG TNGISIDKSC FQFDIWKQSY FETCSIIDQE LEQYADSFYS GTTALTLVRQ GGLLVVANVG DSRAVLATTD
201: DDGRLVSVQL TVDLKPNLPR ESERIMQSRG RVLSCEDEPG VYRVWMPTVE GPGLAISRAF GDYYIKDFGL ISEPELTSRK ITHRDQFAIL ATDGVWDVMS
301: NDEAVEIVSS TGEREDAAKR LVESAICAWK HKRRGAPMDD ISAICLFFHN IPLSKQQAKS V

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.