Factsheet for Solyc10g005640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	91.91	92.57
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	67.45	72.82
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	38.31	60.86
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	53.6	58.32
CDX88554	Canola	nucleus	49.82	57.95
Bra035131.1-P	Field mustard	nucleus	50.54	57.7
AT1G16220.1	Thale cress	nucleus	50.54	57.23
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	14.75	56.94
GSMUA_Achr3P04090_001	Banana	plastid	46.58	56.8
CDY33350	Canola	cytosol, nucleus, plastid	48.92	56.67
CDX87369	Canola	nucleus	50.0	56.5
CDY35072	Canola	cytosol, peroxisome, plastid	48.92	56.43
GSMUA_Achr5P22360_001	Banana	plastid	47.48	56.41
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	48.56	56.02
AT1G79630.1	Thale cress	nucleus	50.0	55.16
Solyc04g056560.2.1	Tomato	cytosol	38.31	53.12
Zm00001d052852_P001	Maize	plastid	47.84	50.86
Os08t0500300-01	Rice	plasma membrane	48.56	50.85
HORVU7Hr1G049260.4	Barley	nucleus	47.48	50.67
TraesCS7A01G241800.1	Wheat	nucleus	47.48	50.38
Zm00001d031329_P002	Maize	nucleus	48.02	48.99
Solyc05g055790.2.1	Tomato	plastid	39.93	47.23
Solyc10g008490.2.1	Tomato	plastid	39.39	46.7
KXG25674	Sorghum	mitochondrion	48.02	46.68
TraesCS7B01G137400.2	Wheat	plastid	47.48	45.91
TraesCS7D01G240800.1	Wheat	mitochondrion	47.3	45.74
Solyc07g054300.2.1	Tomato	plastid	38.67	45.55
Solyc08g065670.2.1	Tomato	peroxisome	24.82	45.1
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	29.32	44.41
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	25.72	42.56
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	25.0	41.87
Solyc10g076320.1.1	Tomato	nucleus	32.73	41.74
Solyc01g065700.2.1	Tomato	nucleus	26.98	41.55
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	31.12	38.19
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	13.85	37.56
Zm00001d008472_P001	Maize	cytosol	10.43	37.42
Solyc01g080400.2.1	Tomato	cytosol	17.09	22.95
Solyc05g018300.2.1	Tomato	cytosol	20.86	10.74

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CX96	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc10g005640.2	EnsemblPlants:Solyc10g005640.2.1	UniParc:UPI000276C967	SEG:seg

Description

No Description!

Coordinates

chr10:+:514112..519337

Molecular Weight (calculated)

61360.1 Da

IEP (calculated)

5.567

GRAVY (calculated)

-0.502

Length

556 amino acids

Sequence
(BLAST)

001: MGICYSSSYR GKKSEEKDCD SKNESKKIDL KLRKSSSNGD FSTFISKLSS SGGGGGGEGA EERGLQQIPG RLIGNGANNV GCLYTQQGKK GINQDAMIIW
101: ENYCSRSDTT LCGVFDGHGP HGHMVASKVR DYLPILLRSE WETKSCSDLN DVSKNENTNG GLHFDDIVDD DLVESVEDEN NVQFPEIHLH IKRSILRAFR
201: SMDKELKLHP SIDCFCSGST AVTLVKQGQD IFVGNVGDSR AVLATRDKDN SLMAVQLTVD LKPNLPREAA RIHKCKGRVF ALQDEPEVAR VWLPNCDSPG
301: LAMARAFGDF CLKDFGLISV PDVYYHHITE RDEFVLLATD GVWDVLSNKE AVDIVASAPS RTTAGRALVE CATRAWRLKY PTSKNDDCAI VCLYLNSTPE
401: KPDVKVIKDQ NKLTNSPEAE IKTNTINGNK LTSSPEAEIK TNTINGNKLT NSPDVEIKTS TIDRNVGRSD TEALSTSQTA GCEDLSEIVP VFESLEEQHP
501: VKDLGQSKRS IAEFLSTAQD DEWSALEGIT RVNSLLSLPR FLSAERRSNS WRRKWL

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.