Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33350 | Canola | cytosol, nucleus, plastid | 84.93 | 86.88 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 84.93 | 86.51 |
| Bra026075.1-P | Field mustard | cytosol, peroxisome, plastid | 84.93 | 86.51 |
| AT1G79630.1 | Thale cress | nucleus | 75.76 | 73.81 |
| GSMUA_Achr4P01590_001 | Banana | cytosol, peroxisome, plastid | 44.6 | 62.57 |
| GSMUA_Achr3P04090_001 | Banana | plastid | 54.18 | 58.33 |
| VIT_19s0015g01920.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.27 | 56.95 |
| GSMUA_Achr5P22360_001 | Banana | plastid | 52.75 | 55.34 |
| Solyc07g066260.2.1 | Tomato | cytosol, nucleus, peroxisome | 57.84 | 55.15 |
| PGSC0003DMT400056929 | Potato | cytosol, nucleus, peroxisome | 57.84 | 55.15 |
| GSMUA_Achr6P17190_001 | Banana | endoplasmic reticulum, vacuole | 16.09 | 54.86 |
| Zm00001d052852_P001 | Maize | plastid | 56.82 | 53.35 |
| Os08t0500300-01 | Rice | plasma membrane | 57.03 | 52.73 |
| PGSC0003DMT400029340 | Potato | cytosol, nucleus, peroxisome | 58.25 | 51.81 |
| TraesCS7A01G241800.1 | Wheat | nucleus | 54.79 | 51.34 |
| HORVU7Hr1G049260.4 | Barley | nucleus | 54.38 | 51.25 |
| Zm00001d031329_P002 | Maize | nucleus | 56.21 | 50.64 |
| Solyc10g005640.2.1 | Tomato | nucleus | 57.23 | 50.54 |
| KXG25674 | Sorghum | mitochondrion | 56.21 | 48.25 |
| TraesCS7D01G240800.1 | Wheat | mitochondrion | 54.99 | 46.96 |
| TraesCS7B01G137400.2 | Wheat | plastid | 54.79 | 46.78 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 43.58 | 46.32 |
| AT4G03415.2 | Thale cress | plastid | 42.36 | 44.44 |
| AT3G02750.3 | Thale cress | plastid | 47.66 | 44.4 |
| AT5G36250.2 | Thale cress | plastid | 41.55 | 44.16 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 28.92 | 42.9 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 30.96 | 42.46 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 32.18 | 41.36 |
| AT5G27930.1 | Thale cress | nucleus | 30.35 | 39.95 |
| AT4G32950.1 | Thale cress | cytosol | 26.48 | 39.88 |
| Zm00001d008472_P001 | Maize | cytosol | 12.42 | 39.35 |
| AT3G16800.2 | Thale cress | nucleus | 27.9 | 39.03 |
| AT3G06270.1 | Thale cress | cytosol | 16.5 | 23.28 |
| AT2G20050.1 | Thale cress | cytosol | 24.44 | 10.97 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:838190 | ProteinID:AAD34674.1 |
| ProteinID:AEE29420.1 | ArrayExpress:AT1G16220 | EnsemblPlantsGene:AT1G16220 | RefSeq:AT1G16220 | TAIR:AT1G16220 | RefSeq:AT1G16220-TAIR-G |
| EnsemblPlants:AT1G16220.1 | TAIR:AT1G16220.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_173072.1 | PFAM:PF00481 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF383 | UniProt:Q9SA22 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0000048269 | SEG:seg | : | : | : |
Description
Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
Coordinates
chr1:+:5548262..5550770
Molecular Weight (calculated)
54356.1 Da
IEP (calculated)
5.208
GRAVY (calculated)
-0.433
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.