Factsheet for Zm00001d052852_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031329_P002	Maize	nucleus	85.47	82.02
Os08t0500300-01	Rice	plasma membrane	78.01	76.84
HORVU7Hr1G049260.4	Barley	nucleus	75.91	76.2
TraesCS7A01G241800.1	Wheat	nucleus	76.29	76.14
TraesCS7B01G137400.2	Wheat	plastid	76.48	69.57
TraesCS7D01G240800.1	Wheat	mitochondrion	76.48	69.57
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.38	62.82
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	17.02	61.81
CDY33350	Canola	cytosol, nucleus, plastid	52.77	57.5
CDY35072	Canola	cytosol, peroxisome, plastid	52.58	57.05
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	52.39	56.85
AT1G16220.1	Thale cress	nucleus	53.35	56.82
CDX88554	Canola	nucleus	51.43	56.28
AT1G79630.1	Thale cress	nucleus	53.54	55.56
Bra035131.1-P	Field mustard	nucleus	51.24	55.03
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	53.73	54.56
CDX87369	Canola	nucleus	51.24	54.47
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	53.35	54.17
Zm00001d021817_P001	Maize	plastid	41.68	50.58
Zm00001d006614_P001	Maize	plastid	41.49	50.23
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	51.82	49.09
Zm00001d050614_P001	Maize	cytosol, nucleus, peroxisome	42.83	48.91
Zm00001d050415_P001	Maize	extracellular	12.81	48.91
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	7.84	48.81
Solyc10g005640.2.1	Tomato	nucleus	50.86	47.84
Zm00001d008472_P001	Maize	cytosol	13.77	46.45
Zm00001d037949_P001	Maize	mitochondrion	31.17	46.18
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	30.78	42.71
Zm00001d011195_P001	Maize	mitochondrion	39.39	41.96
Zm00001d053259_P003	Maize	mitochondrion	39.96	41.8
Zm00001d016474_P001	Maize	mitochondrion	41.49	41.25
Zm00001d005071_P001	Maize	cytosol	36.52	40.38
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	11.09	36.48
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	29.25	33.7
Zm00001d015610_P001	Maize	cytosol, peroxisome, plastid	8.8	30.67
Zm00001d007050_P001	Maize	mitochondrion	18.55	21.37
Zm00001d022347_P001	Maize	mitochondrion	18.36	20.78
Zm00001d053313_P005	Maize	cytosol, plastid	24.09	11.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100272727	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	ProteinID:AQK58228.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
UniProt:K7U841	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000221B82F	EnsemblPlantsGene:Zm00001d052852
EnsemblPlants:Zm00001d052852_P001	EnsemblPlants:Zm00001d052852_T001	SEG:seg	:	:	:

Description

Probable protein phosphatase 2C 6

Coordinates

chr4:-:202627305..202631414

Molecular Weight (calculated)

56369.1 Da

IEP (calculated)

4.887

GRAVY (calculated)

-0.386

Length

523 amino acids

Sequence
(BLAST)

001: MGSCLSSETP AASAGAAAWW RKGRRGTREG AAGGLPSGGK KPPGRGGEMT EDELARVSGR MCGNGASAVA CLHTQQGRKG TNQDAMVVWE SFNSSDSIFC
101: GVFDGHGPYG HFVAKKVRDS LPVKLRTQWQ TSANGPCSSP HQNGSISGSI NSEETASIVD DEWGDGDNTE KLPEMFLPLK RSYLKAFKLM DKELKLHPTV
201: DCFCSGSTAV TLVKQGLDLV IGNLGDSRAI MGTRDASNNL TALQLTVDLK PNLPREAERI QQCKGRVFAL QDEPEVARVW LPNNDSPGLA MARAFGDFCL
301: KDYGLISVPE ISYRLLTEKD EFIILATDGV WDVLSNKEAV DIVASAPSRA TAARALVDSA VRSWRLKFPT SKSDDCAVVC LFLDRAGSAQ ESESEAIVET
401: AEPTGEEVCR RDAGEVDEDM AVADAGVHVV SSAEHSAEAT PLQHSTTSRE LDDEIVPADE HEPPVVLKEP ARCGSARSLA ECISTSEEEE WSALEGVTRV
501: NSLLNLPRIM SGDRRSASWR KRR

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.