Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d020783_P005 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G05640.1 | Zm00001d020783_P005 | AT4G08520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 88.1 | 88.1 |
| TraesCS1A01G228100.1 | Wheat | mitochondrion | 77.05 | 80.47 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 77.34 | 80.29 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 75.64 | 78.76 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 74.79 | 77.88 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 76.49 | 76.7 |
| Os05t0358500-01 | Rice | mitochondrion | 75.35 | 75.35 |
| HORVU1Hr1G059130.3 | Barley | mitochondrion | 78.19 | 73.21 |
| TraesCS1D01G230000.2 | Wheat | cytosol, peroxisome, plastid | 75.92 | 72.83 |
| TraesCS1D01G229600.2 | Wheat | mitochondrion | 75.64 | 72.75 |
| TraesCS1D01G229700.1 | Wheat | mitochondrion | 74.79 | 71.74 |
| TraesCS1A01G228000.1 | Wheat | mitochondrion, peroxisome, plastid | 75.35 | 71.31 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 45.61 | 70.93 |
| GSMUA_Achr11P... | Banana | mitochondrion | 63.74 | 65.79 |
| Zm00001d050415_P001 | Maize | extracellular | 24.65 | 63.5 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 62.04 | 62.57 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 67.42 | 61.82 |
| KRG96758 | Soybean | cytosol, mitochondrion, peroxisome | 62.32 | 59.62 |
| VIT_14s0060g02070.t01 | Wine grape | mitochondrion | 61.19 | 59.02 |
| KRH68473 | Soybean | cytosol, mitochondrion, peroxisome | 61.76 | 58.76 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 59.49 | 58.66 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 57.79 | 58.62 |
| Bra040530.1-P | Field mustard | cytosol, nucleus, peroxisome | 57.79 | 58.62 |
| PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 60.91 | 58.58 |
| KRH33864 | Soybean | nucleus | 60.91 | 58.42 |
| Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 60.62 | 58.31 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 57.79 | 58.29 |
| KRG92929 | Soybean | nucleus | 60.06 | 57.77 |
| Bra036606.1-P | Field mustard | nucleus | 58.64 | 55.5 |
| CDY05554 | Canola | nucleus | 57.79 | 55.43 |
| CDY19742 | Canola | nucleus | 58.07 | 54.96 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 57.79 | 54.69 |
| Bra020569.1-P | Field mustard | nucleus | 57.79 | 54.4 |
| AT5G27930.1 | Thale cress | nucleus | 57.22 | 54.16 |
| CDY25013 | Canola | nucleus | 57.51 | 54.13 |
| HORVU1Hr1G059140.2 | Barley | mitochondrion, plastid | 39.94 | 53.01 |
| AT3G16800.2 | Thale cress | nucleus | 51.84 | 52.14 |
| PGSC0003DMT400015950 | Potato | plastid | 52.41 | 51.68 |
| CDY67911 | Canola | nucleus | 51.27 | 51.57 |
| CDY50503 | Canola | nucleus | 51.27 | 51.57 |
| VIT_05s0077g01820.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 58.64 | 51.49 |
| Bra021202.1-P | Field mustard | nucleus | 50.99 | 51.28 |
| Solyc01g065700.2.1 | Tomato | nucleus | 52.41 | 51.25 |
| Bra022179.1-P | Field mustard | nucleus | 50.42 | 50.71 |
| CDX95903 | Canola | nucleus | 50.14 | 50.43 |
| CDX92097 | Canola | nucleus | 50.14 | 50.43 |
| KRH50799 | Soybean | cytosol | 51.56 | 49.59 |
| KRH02293 | Soybean | cytosol | 51.27 | 48.14 |
| Zm00001d009234_P001 | Maize | cytosol, peroxisome, plastid | 10.48 | 44.05 |
| Zm00001d016332_P001 | Maize | cytosol, nucleus, peroxisome | 43.06 | 40.32 |
| Zm00001d009620_P001 | Maize | cytosol, peroxisome, plastid | 15.3 | 33.96 |
| Zm00001d006614_P001 | Maize | plastid | 41.36 | 33.8 |
| Zm00001d021817_P001 | Maize | plastid | 40.79 | 33.41 |
| Zm00001d050614_P001 | Maize | cytosol, nucleus, peroxisome | 43.34 | 33.41 |
| Zm00001d053566_P002 | Maize | nucleus, peroxisome, plastid | 40.79 | 31.72 |
| Zm00001d052852_P001 | Maize | plastid | 46.18 | 31.17 |
| Zm00001d031329_P002 | Maize | nucleus | 46.46 | 30.09 |
| Zm00001d011195_P001 | Maize | mitochondrion | 41.64 | 29.94 |
| Zm00001d005071_P001 | Maize | cytosol | 39.66 | 29.6 |
| Zm00001d053259_P003 | Maize | mitochondrion | 41.64 | 29.4 |
| Zm00001d015610_P001 | Maize | cytosol, peroxisome, plastid | 12.18 | 28.67 |
| Zm00001d016474_P001 | Maize | mitochondrion | 41.08 | 27.57 |
| Zm00001d008472_P001 | Maize | cytosol | 11.33 | 25.81 |
| Zm00001d007050_P001 | Maize | mitochondrion | 25.5 | 19.82 |
| Zm00001d022347_P001 | Maize | mitochondrion | 25.5 | 19.48 |
| Zm00001d053313_P005 | Maize | cytosol, plastid | 26.63 | 8.67 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100857041 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | ProteinID:AQK85272.1 |
| EMBL:BT069276 | UniProt:C0PLV7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR001932 | InterPro:IPR036457 | EMBL:KJ728520 | EMBL:KJ855117 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF198 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI000189D7BE | EnsemblPlantsGene:Zm00001d037949 | EnsemblPlants:Zm00001d037949_P001 | EnsemblPlants:Zm00001d037949_T001 | SEG:seg |
Description
Probable protein phosphatase 2C 73
Coordinates
chr6:+:143243175..143246248
Molecular Weight (calculated)
38502.7 Da
IEP (calculated)
7.524
GRAVY (calculated)
-0.278
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQISSLLQG LARSLSVGRD RDRDRDRKGN GAGDRKTAVP AVLRTSGTLW GDGSDTFAAV CSRRGEKGIN QDCSIVWEGF GCQEGTIFCG IFDGHGQWGH
101: YVAKAVRDSL PPSLLCHWQE ALALASLIDD GEKKLGDCQF DLWKRSYVAA CAAVDDELRR SRRLDAVQSG CTALSIVKQG DLMIVANVGD SRAVLGTTSD
201: DGAIAAVQLT VDLKPNLPQE KERIRRCNGQ VYCLADEPGV HRVWQPSRES PGLAMSRAFG DYCVKDCGVI STPEVTQKRI SSSDQFIILA TDGVWDVLSN
301: DEAVHIVAGT PDRAKAAKRL VECAVRAWRR KRRDIAVDDC SAICLFFHPP PPS
101: YVAKAVRDSL PPSLLCHWQE ALALASLIDD GEKKLGDCQF DLWKRSYVAA CAAVDDELRR SRRLDAVQSG CTALSIVKQG DLMIVANVGD SRAVLGTTSD
201: DGAIAAVQLT VDLKPNLPQE KERIRRCNGQ VYCLADEPGV HRVWQPSRES PGLAMSRAFG DYCVKDCGVI STPEVTQKRI SSSDQFIILA TDGVWDVLSN
301: DEAVHIVAGT PDRAKAAKRL VECAVRAWRR KRRDIAVDDC SAICLFFHPP PPS
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Arabidopsis Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.