Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92097 | Canola | nucleus | 96.58 | 96.58 |
| CDY50503 | Canola | nucleus | 91.74 | 91.74 |
| CDY67911 | Canola | nucleus | 91.45 | 91.45 |
| AT3G16800.2 | Thale cress | nucleus | 89.74 | 89.74 |
| GSMUA_Achr11P... | Banana | mitochondrion | 55.56 | 57.02 |
| KRH50799 | Soybean | cytosol | 57.27 | 54.77 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 53.85 | 54.0 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 53.28 | 53.74 |
| KRH02293 | Soybean | cytosol | 57.27 | 53.46 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 51.28 | 52.94 |
| Solyc01g065700.2.1 | Tomato | nucleus | 54.13 | 52.63 |
| PGSC0003DMT400015950 | Potato | plastid | 52.99 | 51.96 |
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 51.85 | 51.56 |
| CDY05554 | Canola | nucleus | 53.28 | 50.82 |
| TraesCS1A01G228100.1 | Wheat | mitochondrion | 48.72 | 50.59 |
| CDY25013 | Canola | nucleus | 53.85 | 50.4 |
| Zm00001d037949_P001 | Maize | mitochondrion | 50.43 | 50.14 |
| CDY19742 | Canola | nucleus | 53.28 | 50.13 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 50.14 | 50.0 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 48.15 | 49.85 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 32.19 | 49.78 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 52.71 | 49.6 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 47.58 | 49.26 |
| VIT_05s0077g01820.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 55.84 | 48.76 |
| TraesCS1D01G230000.2 | Wheat | cytosol, peroxisome, plastid | 50.43 | 48.1 |
| Os05t0358500-01 | Rice | mitochondrion | 47.58 | 47.31 |
| TraesCS1D01G229600.2 | Wheat | mitochondrion | 48.15 | 46.05 |
| TraesCS1D01G229700.1 | Wheat | mitochondrion | 48.15 | 45.92 |
| TraesCS1A01G228000.1 | Wheat | mitochondrion, peroxisome, plastid | 48.43 | 45.58 |
| CDY72270 | Canola | cytosol | 27.35 | 45.5 |
| HORVU1Hr1G059130.3 | Barley | mitochondrion | 48.72 | 45.36 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 44.16 | 40.26 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 35.61 | 40.19 |
| CDX91383 | Canola | cytosol | 36.18 | 39.69 |
| HORVU1Hr1G059140.2 | Barley | mitochondrion, plastid | 28.77 | 37.97 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 38.46 | 37.4 |
| CDY70364 | Canola | cytosol, peroxisome | 37.61 | 36.46 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 36.18 | 36.29 |
| CDY56581 | Canola | cytosol | 35.04 | 36.18 |
| CDX88210 | Canola | cytosol | 34.76 | 36.09 |
| CDX80553 | Canola | cytosol | 34.47 | 35.8 |
| CDY00978 | Canola | cytosol | 35.61 | 35.61 |
| CDY45023 | Canola | cytosol | 32.76 | 35.28 |
| CDX72381 | Canola | cytosol | 32.19 | 34.66 |
| CDY13509 | Canola | cytosol | 31.91 | 34.36 |
| CDY28276 | Canola | cytosol | 31.91 | 34.36 |
| CDY37649 | Canola | mitochondrion, plastid | 40.74 | 33.26 |
| CDX97493 | Canola | cytosol | 31.34 | 33.13 |
| CDY69821 | Canola | plastid | 37.04 | 33.08 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 35.9 | 32.73 |
| CDY63003 | Canola | mitochondrion, plastid | 40.17 | 32.19 |
| CDY53741 | Canola | plastid | 42.73 | 32.12 |
| CDY53743 | Canola | plastid | 42.73 | 32.05 |
| CDY34568 | Canola | cytosol | 12.54 | 31.43 |
| CDX89881 | Canola | plastid | 36.75 | 30.35 |
| CDX92009 | Canola | plastid | 40.74 | 30.23 |
| CDX88554 | Canola | nucleus | 41.03 | 30.13 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 36.18 | 29.95 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 35.9 | 29.79 |
| CDX87369 | Canola | nucleus | 41.03 | 29.27 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 39.89 | 29.17 |
| CDY21964 | Canola | plastid | 36.18 | 28.93 |
| CDY48559 | Canola | plastid | 36.18 | 28.86 |
| CDX74239 | Canola | plastid | 39.89 | 28.81 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 39.03 | 28.42 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 41.88 | 27.58 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 41.6 | 27.55 |
| CDY08060 | Canola | plastid | 22.51 | 22.32 |
| CDX74112 | Canola | plastid | 22.22 | 22.03 |
| CDY18847 | Canola | cytosol | 18.52 | 19.94 |
| CDX82702 | Canola | nucleus | 17.38 | 13.56 |
| CDY35922 | Canola | cytosol | 25.64 | 8.33 |
| CDY05716 | Canola | cytosol | 25.36 | 8.26 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078E929 | EnsemblPlants:CDX95903 |
| ProteinID:CDX95903 | ProteinID:CDX95903.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00101902001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF310 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EBE7F5 | : | : | : | : | : |
Description
BnaC05g36540D
Coordinates
chrLK031891:-:1300086..1301572
Molecular Weight (calculated)
38937.9 Da
IEP (calculated)
8.039
GRAVY (calculated)
-0.221
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLPAFLDG LARSVSMKKG KYLSEDEDGG KEIAKSMMKY SKKNSTFLGS SGFVSSETSK RFTSICTNRG EKGINQDRAI VWEGFGSQED ITFCGMFDGH
101: GPWGHKITKR VKKLFPASLL CQWQQTLASL SSSPECFSPF DLWKQPCMKT FSIIDLDLKI HPSIDSYCSG CTALTAILQG DHLVVANAGD SRAVIATTSD
201: DGVGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGR SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITSKDQFLIL ATDGMWDVMT
301: NDEAVEIARG VKDRRKSAER LVKKAMMLWR KKRRSIAMDD ISALCLFFHP C
101: GPWGHKITKR VKKLFPASLL CQWQQTLASL SSSPECFSPF DLWKQPCMKT FSIIDLDLKI HPSIDSYCSG CTALTAILQG DHLVVANAGD SRAVIATTSD
201: DGVGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGR SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITSKDQFLIL ATDGMWDVMT
301: NDEAVEIARG VKDRRKSAER LVKKAMMLWR KKRRSIAMDD ISALCLFFHP C
001: MVLLPAFLDG LARTVSTKKG KKLSEDEDGG REIAKSMIKD SKKNSTLLGT SGFVSSESSK RFTSICSNRG EKGINQDRAI VWEGFGCQED ITFCGMFDGH
101: GPWGHVIAKR VKKSFPSSLL CQWQQTLASL SSSPECSSPF DLWKQACLKT FSIIDLDLKI SPSIDSYCSG CTALTAVLQG DHLVIANAGD SRAVIATTSD
201: DGNGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGG SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NNEAVEIVRG VKERRKSAKR LVERAVTLWR RKRRSIAMDD ISVLCLFFRP S
101: GPWGHVIAKR VKKSFPSSLL CQWQQTLASL SSSPECSSPF DLWKQACLKT FSIIDLDLKI SPSIDSYCSG CTALTAVLQG DHLVIANAGD SRAVIATTSD
201: DGNGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGG SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NNEAVEIVRG VKERRKSAKR LVERAVTLWR RKRRSIAMDD ISVLCLFFRP S
Arabidopsis Description
Probable protein phosphatase 2C 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.