CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001189.1-P	Field mustard	plastid	98.87	98.87
CDY08060	Canola	plastid	97.46	97.46
AT3G06270.1	Thale cress	cytosol	86.44	87.93
CDY18847	Canola	cytosol	79.66	86.5
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.66	68.95
VIT_05s0020g02360.t01	Wine grape	cytosol	71.19	64.78
Solyc01g080400.2.1	Tomato	cytosol	69.49	59.42
PGSC0003DMT400081764	Potato	cytosol	68.93	58.94
KRH50972	Soybean	cytosol	69.77	58.39
KRH02158	Soybean	cytosol	68.36	58.17
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	70.06	57.54
KRH20951	Soybean	plastid	69.77	57.31
GSMUA_Achr10P...	Banana	mitochondrion	63.28	50.91
GSMUA_Achr8P05980_001	Banana	cytosol	55.37	49.12
Os07t0646100-00	Rice	plasma membrane	50.56	47.86
GSMUA_Achr3P24900_001	Banana	cytosol	49.72	46.93
TraesCS2D01G144500.3	Wheat	cytosol	52.26	40.13
Zm00001d022347_P001	Maize	mitochondrion	52.26	40.04
Zm00001d007050_P001	Maize	mitochondrion	51.13	39.87
EER99809	Sorghum	plastid	51.13	39.69
TraesCS2B01G166100.3	Wheat	cytosol	52.26	39.61
TraesCS2A01G141100.2	Wheat	cytosol	52.26	39.45
CDX80553	Canola	cytosol	27.68	28.99
CDX88210	Canola	cytosol	27.12	28.4
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	42.94	28.15
CDY18810	Canola	cytosol, nucleus, peroxisome	26.84	27.3
CDX72381	Canola	cytosol	24.29	26.38
CDY28276	Canola	cytosol	24.29	26.38
CDY45023	Canola	cytosol	24.29	26.38
CDY72270	Canola	cytosol	15.54	26.07
CDY13509	Canola	cytosol	23.73	25.77
CDY05554	Canola	nucleus	26.27	25.27
CDY40298	Canola	cytosol, peroxisome, plastid	25.71	25.21
CDY25013	Canola	nucleus	26.27	24.8
CDY19742	Canola	nucleus	25.42	24.13
CDY53338	Canola	cytosol, mitochondrion, nucleus	25.42	24.13
CDY50503	Canola	nucleus	23.16	23.36
CDY67911	Canola	nucleus	23.16	23.36
CDY69821	Canola	plastid	25.42	22.9
CDX92097	Canola	nucleus	22.6	22.79
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	24.29	22.34
CDX95903	Canola	nucleus	22.03	22.22
CDY46975	Canola	cytosol, mitochondrion, peroxisome	19.49	22.19
CDX91383	Canola	cytosol	19.21	21.25
CDX89881	Canola	plastid	25.14	20.94
CDY70364	Canola	cytosol, peroxisome	20.9	20.44
CDY51389	Canola	cytosol, peroxisome, plastid	24.29	20.33
CDX82702	Canola	nucleus	25.71	20.22
CDY21964	Canola	plastid	24.86	20.05
CDY56581	Canola	cytosol	19.21	20.0
CDY15466	Canola	cytosol, peroxisome, plastid	23.73	19.81
CDY48559	Canola	plastid	24.58	19.77
CDY37649	Canola	mitochondrion, plastid	23.73	19.53
CDY53741	Canola	plastid	25.71	19.49
CDX92009	Canola	plastid	25.99	19.45
CDY53743	Canola	plastid	25.42	19.23
CDY63003	Canola	mitochondrion, plastid	23.73	19.18
CDY00978	Canola	cytosol	18.93	19.09
CDY35922	Canola	cytosol	57.91	18.96
CDY05716	Canola	cytosol	57.63	18.94
CDX74239	Canola	plastid	25.99	18.93
CDX97493	Canola	cytosol	17.51	18.67
CDY34568	Canola	cytosol	7.34	18.57
CDX88554	Canola	nucleus	23.16	17.15
CDY33350	Canola	cytosol, nucleus, plastid	23.16	17.08
CDY35072	Canola	cytosol, peroxisome, plastid	22.88	16.8
CDY51537	Canola	cytosol, peroxisome, plastid	24.86	16.51
CDY28706	Canola	cytosol, peroxisome, plastid	24.58	16.42
CDX87369	Canola	nucleus	22.32	16.06

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078CB94	EnsemblPlants:CDX74112
ProteinID:CDX74112	ProteinID:CDX74112.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0043169
EnsemblPlantsGene:GSBRNA2T00111867001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353	PANTHER:PTHR24353:SF115	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE80DB	SEG:seg	:	:	:

Description

BnaA03g29350D

Coordinates

chrLK031800:-:1372696..1374405

Molecular Weight (calculated)

38625.1 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.354

Length

354 amino acids

Sequence
(BLAST)

001: MGCVQCKCCS RYPSSSSEAA SSRGHGPTSK PQNDAVPKPL SSTTIHVPSP SFEMVYSVLS QRGYYPDSPD KENQDTYCIK TELQGNPNVH LFGVFDGHGV
101: FGTQCSNFVK NRVVELLSED SALLQDPEKA YKTAFLRVNE ELHNSEIDDS MSGTTAITVL VVGDKIYVAN VGDSRAVLAV KDGSHRNRIL AEDLSYDQTP
201: FRTDECERVK GCGARVLSVD QVEGLKDPSV QTWASEENEG GDPPRLWVQN GMYPGTAFTR SVGDSLAEGI GVTAEPEVSM VKLSPNHLFF VVASDGIFEF
301: LPSQAVVDMV GRYADPRDGC AAAAAESYKL WLQHENRTDD ITIIIVQIKN LSNE

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.