CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51537	Canola	cytosol, peroxisome, plastid	96.23	95.68
Bra040598.1-P	Field mustard	plastid	80.19	92.79
CDY53743	Canola	plastid	74.34	84.19
CDY53741	Canola	plastid	74.15	84.15
CDX92009	Canola	plastid	70.94	79.49
CDX74239	Canola	plastid	71.7	78.19
AT3G02750.3	Thale cress	plastid	73.02	73.43
CDY72270	Canola	cytosol	27.74	69.67
VIT_04s0023g00690.t01	Wine grape	plastid	59.43	64.81
Solyc04g056560.2.1	Tomato	cytosol	47.55	62.84
PGSC0003DMT400027278	Potato	cytosol	47.92	62.25
CDY46975	Canola	cytosol, mitochondrion, peroxisome	36.23	61.74
PGSC0003DMT400060345	Potato	plastid	53.77	60.64
CDX91383	Canola	cytosol	36.42	60.31
Solyc05g055790.2.1	Tomato	plastid	52.64	59.36
CDY37649	Canola	mitochondrion, plastid	47.55	58.6
CDY70364	Canola	cytosol, peroxisome	39.81	58.29
KRH45219	Soybean	vacuole	10.38	57.89
CDY63003	Canola	mitochondrion, plastid	47.55	57.53
CDY00978	Canola	cytosol	37.36	56.41
CDY56581	Canola	cytosol	34.53	53.82
CDX97493	Canola	cytosol	31.89	50.9
CDY69821	Canola	plastid	37.36	50.38
CDX89881	Canola	plastid	40.0	49.88
CDY15466	Canola	cytosol, peroxisome, plastid	39.62	49.53
CDY48559	Canola	plastid	40.75	49.09
CDY21964	Canola	plastid	40.57	48.97
CDX88554	Canola	nucleus	44.15	48.95
CDY51389	Canola	cytosol, peroxisome, plastid	38.68	48.46
CDY33350	Canola	cytosol, nucleus, plastid	43.21	47.71
CDY40298	Canola	cytosol, peroxisome, plastid	32.26	47.37
CDX87369	Canola	nucleus	43.96	47.36
CDY35072	Canola	cytosol, peroxisome, plastid	42.64	46.89
CDY34568	Canola	cytosol	12.26	46.43
CDY18810	Canola	cytosol, nucleus, peroxisome	30.0	45.69
CDY53338	Canola	cytosol, mitochondrion, nucleus	31.7	45.04
CDY19742	Canola	nucleus	31.51	44.77
CDY05554	Canola	nucleus	30.75	44.29
CDY25013	Canola	nucleus	30.38	42.93
CDY28276	Canola	cytosol	26.04	42.33
CDY45023	Canola	cytosol	25.66	41.72
CDY50503	Canola	nucleus	27.55	41.6
CDX95903	Canola	nucleus	27.55	41.6
CDY67911	Canola	nucleus	27.36	41.31
CDX92097	Canola	nucleus	27.36	41.31
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	29.81	41.04
CDX80553	Canola	cytosol	26.04	40.83
CDX72381	Canola	cytosol	25.09	40.8
CDX88210	Canola	cytosol	25.85	40.53
CDY13509	Canola	cytosol	24.53	39.88
CDY08060	Canola	plastid	16.42	24.58
CDX74112	Canola	plastid	16.42	24.58
CDY18847	Canola	cytosol	14.72	23.93
CDX82702	Canola	nucleus	14.34	16.89
CDY35922	Canola	cytosol	22.45	11.01
CDY05716	Canola	cytosol	22.26	10.96

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078GT66	UniProt:A0A078GT66
EnsemblPlants:CDY28706	ProteinID:CDY28706	ProteinID:CDY28706.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00041343001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EEC3A6	SEG:seg	:	:	:

Description

BnaCnng05920DBnaCnng05920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT66]

Coordinates

chrLK032225:-:307677..313069

Molecular Weight (calculated)

58205.2 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.211

Length

530 amino acids

Sequence
(BLAST)

001: MMICRSAACM RGEVDACWDL CQFASWPTCD FSFCTRNVLY LFPYLNPIIA LCGDNLDLKP QSFSLEDHRG CDCTAVGLEC LVNIIRALRM GSCLSAESRS
101: PTPGSPGFGV KKRKNSKKRL GSRNSSFDSR RDDPLHRVPG RMYLNGASEA ACIFTQQGKK GPNQDAMVVW ESFGSMTDTV FCGVFDGHGP YGHMVAKRVR
201: DNLPLKLSAY WEAKVPINSA STINNSEDAS FVSAEEEPSP SVDIEKEESQ SELFQTLKDA FLKAFKVMDR ELKFHKSVDC FCSGTTAVTL IKQGEYLVVG
301: NVGDSRAVMG TRNGENALVA VQLTVDLKPN LPAEEERIKK CRGRVFALRD EPEVCRVWLP NCDSPGLAMA RAFGDFCLKD FGLISVPDVS FRRLTEQDEF
401: IVLASDGIWD VLSNEEVVAI VASAPSRSSA ARALVESAVR AWRYKYPTSK VDDCAAVCLY LHSNDTNLIS SASSISKLED DDDASEPSGL GRSSTVRTGK
501: EIALDEKYSA LEGVARVNTL LNLPRFVPGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.