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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036606.1-P Field mustard nucleus 99.46 99.46
CDY53338 Canola cytosol, mitochondrion, nucleus 98.66 98.66
CDY05554 Canola nucleus 90.35 91.58
CDY25013 Canola nucleus 91.69 91.2
AT5G27930.1 Thale cress nucleus 88.74 88.74
CDY18810 Canola cytosol, nucleus, peroxisome 75.87 81.32
KRG96758 Soybean cytosol, mitochondrion, peroxisome 69.97 70.73
VIT_14s0060g02070.t01 Wine grape mitochondrion 68.9 70.22
KRH68473 Soybean cytosol, mitochondrion, peroxisome 69.44 69.81
KRH33864 Soybean nucleus 67.02 67.93
GSMUA_Achr11P... Banana mitochondrion 61.93 67.54
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 66.22 67.3
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 65.95 67.03
KRG92929 Soybean nucleus 65.95 67.03
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 62.73 66.86
TraesCS1A01G228100.1 Wheat mitochondrion 55.23 60.95
TraesCS1B01G242300.1 Wheat mitochondrion 55.23 60.77
TraesCS1B01G242200.1 Wheat mitochondrion 54.96 60.47
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 54.96 60.29
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 56.3 59.66
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 56.3 59.49
Zm00001d037949_P001 Maize mitochondrion 54.96 58.07
Os05t0358500-01 Rice mitochondrion 54.16 57.22
CDY67911 Canola nucleus 53.62 56.98
CDY50503 Canola nucleus 53.62 56.98
TraesCS1D01G229700.1 Wheat mitochondrion 55.23 55.98
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 34.05 55.95
TraesCS1D01G229600.2 Wheat mitochondrion 54.96 55.86
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 54.96 54.96
HORVU1Hr1G059130.3 Barley mitochondrion 55.23 54.64
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 53.89 54.62
CDX95903 Canola nucleus 50.13 53.28
CDX92097 Canola nucleus 49.87 52.99
TraesCS1A01G228200.1 Wheat mitochondrion 47.19 45.71
CDY72270 Canola cytosol 25.74 45.5
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 31.37 43.98
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 39.41 42.0
CDY40298 Canola cytosol, peroxisome, plastid 38.61 39.89
CDX91383 Canola cytosol 33.78 39.38
CDY46975 Canola cytosol, mitochondrion, peroxisome 32.44 38.91
CDX80553 Canola cytosol 34.85 38.46
CDX88210 Canola cytosol 34.58 38.17
CDX72381 Canola cytosol 33.24 38.04
CDY45023 Canola cytosol 33.24 38.04
CDY13509 Canola cytosol 32.98 37.73
CDY28276 Canola cytosol 32.98 37.73
CDY70364 Canola cytosol, peroxisome 36.46 37.57
CDY69821 Canola plastid 39.41 37.4
CDY00978 Canola cytosol 33.51 35.61
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 36.46 35.32
CDY56581 Canola cytosol 32.17 35.29
CDY37649 Canola mitochondrion, plastid 40.48 35.12
CDX92009 Canola plastid 44.5 35.1
CDY53741 Canola plastid 43.7 34.9
CDY53743 Canola plastid 43.7 34.83
CDY15466 Canola cytosol, peroxisome, plastid 39.14 34.43
CDX89881 Canola plastid 39.14 34.35
CDY63003 Canola mitochondrion, plastid 40.21 34.25
CDY51389 Canola cytosol, peroxisome, plastid 38.61 34.04
CDX74239 Canola plastid 44.24 33.95
CDY21964 Canola plastid 39.14 33.26
CDY48559 Canola plastid 38.61 32.73
CDX97493 Canola cytosol 28.42 31.93
CDX88554 Canola nucleus 40.75 31.8
CDX87369 Canola nucleus 41.82 31.71
CDY35072 Canola cytosol, peroxisome, plastid 40.75 31.54
CDY28706 Canola cytosol, peroxisome, plastid 44.77 31.51
CDY33350 Canola cytosol, nucleus, plastid 40.48 31.46
CDY51537 Canola cytosol, peroxisome, plastid 43.97 30.77
CDY34568 Canola cytosol 10.99 29.29
CDY08060 Canola plastid 24.4 25.71
CDX74112 Canola plastid 24.13 25.42
CDY18847 Canola cytosol 20.38 23.31
CDX82702 Canola nucleus 16.09 13.33
CDY05716 Canola cytosol 25.74 8.91
CDY35922 Canola cytosol 25.47 8.79
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078G408UniProt:A0A078G408
EnsemblPlants:CDY19742ProteinID:CDY19742ProteinID:CDY19742.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00009481001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF198SMART:SM00332
SUPFAM:SSF81606UniParc:UPI0004EE0C37SEG:seg:::
Description
BnaA09g03950DBnaA09g03950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G408]
Coordinates
chrLK032100:-:174016..176800
Molecular Weight (calculated)
41465.3 Da
IEP (calculated)
7.943
GRAVY (calculated)
-0.346
Length
373 amino acids
Sequence
(BLAST)
001: MGYFSSMFSG FARSFSIKKV KNNNGTSDAK EAADEMARDA KKKEKILKSC GYVYADGSNN SASVFSKRGE KGVNQDCAIV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKHV RNSMPSSLLC NWQKSLAQAT LLDPEIDLEG SNKKLSRFDI WKHSYLKTCA SVDQELEHHR KIDSYNSGTT ALTIVRQGEV IYISNVGDSR
201: AVLATVSDEG SLVAVQLTLD FKPNLPQEKE RILGCKGRVF CLKDEPGVHR VWQPDAETPG LAMSRAFGDY CIKDYGLVSV PEVTQRHISA KDHFIILASD
301: GIWDVISNQE AIEIVSLTTE RPKAAKRLVE QAVQAWKKKR RGIAMDDMSV VCLFLHSSSS SLSQHVHHST TFK
Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)
001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
Arabidopsis Description
PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.