CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021414.1-P	Field mustard	plastid	98.72	98.93
CDY53741	Canola	plastid	97.86	98.07
CDX92009	Canola	plastid	84.83	83.93
CDX74239	Canola	plastid	85.68	82.51
AT3G02750.3	Thale cress	plastid	87.61	77.8
CDY28706	Canola	cytosol, peroxisome, plastid	84.19	74.34
CDY51537	Canola	cytosol, peroxisome, plastid	84.19	73.92
CDY72270	Canola	cytosol	31.2	69.19
VIT_04s0023g00690.t01	Wine grape	plastid	70.09	67.49
Solyc04g056560.2.1	Tomato	cytosol	55.77	65.09
PGSC0003DMT400027278	Potato	cytosol	56.62	64.95
PGSC0003DMT400060345	Potato	plastid	62.61	62.34
Solyc05g055790.2.1	Tomato	plastid	61.75	61.49
CDY46975	Canola	cytosol, mitochondrion, peroxisome	40.17	60.45
CDY37649	Canola	mitochondrion, plastid	54.91	59.77
CDX91383	Canola	cytosol	40.81	59.69
CDY70364	Canola	cytosol, peroxisome	45.3	58.56
CDY63003	Canola	mitochondrion, plastid	54.7	58.45
KRH45219	Soybean	vacuole	11.75	57.89
CDY00978	Canola	cytosol	42.31	56.41
CDY56581	Canola	cytosol	38.46	52.94
CDY69821	Canola	plastid	43.16	51.4
CDX97493	Canola	cytosol	35.9	50.6
CDX89881	Canola	plastid	45.94	50.59
CDY15466	Canola	cytosol, peroxisome, plastid	45.09	49.76
CDX88554	Canola	nucleus	50.43	49.37
CDY48559	Canola	plastid	46.15	49.09
CDY40298	Canola	cytosol, peroxisome, plastid	37.82	49.03
CDY21964	Canola	plastid	45.94	48.97
CDY51389	Canola	cytosol, peroxisome, plastid	44.23	48.94
CDY33350	Canola	cytosol, nucleus, plastid	49.79	48.54
CDY35072	Canola	cytosol, peroxisome, plastid	49.15	47.72
CDX87369	Canola	nucleus	49.57	47.15
CDY18810	Canola	cytosol, nucleus, peroxisome	34.4	46.26
CDY34568	Canola	cytosol	13.46	45.0
CDY53338	Canola	cytosol, mitochondrion, nucleus	35.04	43.97
CDY19742	Canola	nucleus	34.83	43.7
CDY05554	Canola	nucleus	33.97	43.21
CDX95903	Canola	nucleus	32.05	42.73
CDY50503	Canola	nucleus	32.05	42.73
CDX92097	Canola	nucleus	31.84	42.45
CDY67911	Canola	nucleus	31.84	42.45
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	34.83	42.34
CDY28276	Canola	cytosol	29.49	42.33
CDY25013	Canola	nucleus	33.55	41.87
CDX72381	Canola	cytosol	29.06	41.72
CDY45023	Canola	cytosol	29.06	41.72
CDX80553	Canola	cytosol	30.13	41.72
CDX88210	Canola	cytosol	29.91	41.42
CDY13509	Canola	cytosol	28.42	40.8
CDX74112	Canola	plastid	19.23	25.42
CDY08060	Canola	plastid	19.02	25.14
CDY18847	Canola	cytosol	16.88	24.23
CDX82702	Canola	nucleus	17.09	17.78
CDY35922	Canola	cytosol	26.5	11.47
CDY05716	Canola	cytosol	26.28	11.42

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078IXJ5	UniProt:A0A078IXJ5
EnsemblPlants:CDY53743	ProteinID:CDY53743	ProteinID:CDY53743.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00011327001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EEF5BA	SEG:seg	:	:	:

Description

BnaAnng12710DBnaAnng12710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXJ5]

Coordinates

chrLK033233:-:20240..22612

Molecular Weight (calculated)

50913.9 Da

IEP (calculated)

5.437

GRAVY (calculated)

-0.391

Length

468 amino acids

Sequence
(BLAST)

001: MGSCLSAESM SPRPGSPCSP GFGVRKRKNS KNKRLAGSRN SSFDSRRDDP LHRVPGRMFL NGSSDVACIF TQQGKKGPNQ DAMVVWESFG SRTDTVFCGV
101: FDGHGPFGHM VAKRVRDNLP LKLSAYWEAK VPVEGSIKTV NNSANNNSED AASFVSTEEE PRPEESTESE LFQTLKEAFL KAFKVMDREL KFHGSVDCFC
201: SGTTAVTLIK QGEYLVVGNV GDSRAVMGTR DGENGLVAVQ LTVDLKPNLP AEEERIKKCR GRVFALRDEP DVCRVWLPNC DSPGLAMARA FGDFCLKDFG
301: LISVPEVSFR RLTEQDEFIV LATDGVWDVL SNEEVVKIVA SAPSRSSAAR ALVETAVRAW RHKYPTSKVD DCAAVCLYLN SNGSNAISTA SSFSKLEDGD
401: EIDDGSGPSG GLGRSSTVRT GKEIALDESE AEKLIKEEDT EHGTEYSALE GVARVNTLLN LPRFVPGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.