CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001060.1-P	Field mustard	plastid	97.94	99.79
CDX92009	Canola	plastid	91.36	93.87
CDY53743	Canola	plastid	82.51	85.68
CDY53741	Canola	plastid	82.1	85.44
AT3G02750.3	Thale cress	plastid	82.72	76.28
CDY28706	Canola	cytosol, peroxisome, plastid	78.19	71.7
CDY51537	Canola	cytosol, peroxisome, plastid	78.4	71.48
CDY72270	Canola	cytosol	29.22	67.3
VIT_04s0023g00690.t01	Wine grape	plastid	64.2	64.2
Solyc04g056560.2.1	Tomato	cytosol	52.88	64.09
PGSC0003DMT400027278	Potato	cytosol	53.29	63.48
PGSC0003DMT400060345	Potato	plastid	58.44	60.43
CDY46975	Canola	cytosol, mitochondrion, peroxisome	38.07	59.49
Solyc05g055790.2.1	Tomato	plastid	57.2	59.15
CDX91383	Canola	cytosol	38.27	58.12
CDY70364	Canola	cytosol, peroxisome	43.0	57.73
CDY37649	Canola	mitochondrion, plastid	50.62	57.21
CDY63003	Canola	mitochondrion, plastid	50.41	55.94
KRH45219	Soybean	vacuole	10.91	55.79
CDY00978	Canola	cytosol	39.71	54.99
CDY56581	Canola	cytosol	36.01	51.47
CDY69821	Canola	plastid	40.74	50.38
CDY15466	Canola	cytosol, peroxisome, plastid	43.21	49.53
CDX89881	Canola	plastid	43.21	49.41
CDX97493	Canola	cytosol	33.74	49.4
CDY51389	Canola	cytosol, peroxisome, plastid	42.39	48.7
CDX88554	Canola	nucleus	47.74	48.54
CDY48559	Canola	plastid	43.42	47.95
CDY40298	Canola	cytosol, peroxisome, plastid	35.6	47.92
CDY21964	Canola	plastid	43.21	47.84
CDY33350	Canola	cytosol, nucleus, plastid	45.88	46.46
CDX87369	Canola	nucleus	46.91	46.34
CDY35072	Canola	cytosol, peroxisome, plastid	45.27	45.64
CDY34568	Canola	cytosol	12.96	45.0
CDY18810	Canola	cytosol, nucleus, peroxisome	32.1	44.83
CDY19742	Canola	nucleus	33.95	44.24
CDY53338	Canola	cytosol, mitochondrion, nucleus	33.95	44.24
CDY05554	Canola	nucleus	33.13	43.75
CDY25013	Canola	nucleus	32.72	42.4
CDY28276	Canola	cytosol	27.98	41.72
CDX80553	Canola	cytosol	28.81	41.42
CDX88210	Canola	cytosol	28.6	41.12
CDY45023	Canola	cytosol	27.57	41.1
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	32.51	41.04
CDX72381	Canola	cytosol	26.95	40.18
CDY67911	Canola	nucleus	28.81	39.89
CDY50503	Canola	nucleus	28.81	39.89
CDX95903	Canola	nucleus	28.81	39.89
CDX92097	Canola	nucleus	28.6	39.6
CDY13509	Canola	cytosol	26.54	39.57
CDX74112	Canola	plastid	18.93	25.99
CDY08060	Canola	plastid	18.52	25.42
CDY18847	Canola	cytosol	16.26	24.23
CDX82702	Canola	nucleus	15.84	17.11
CDY35922	Canola	cytosol	23.87	10.73
CDY05716	Canola	cytosol	23.66	10.68

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	GO:A0A078CDJ8	EnsemblPlants:CDX74239	ProteinID:CDX74239
ProteinID:CDX74239.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00112020001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EED98D
SEG:seg	:	:	:	:	:

Description

BnaA03g28080D

Coordinates

chrLK031800:+:1915764..1918554

Molecular Weight (calculated)

52877.1 Da

IEP (calculated)

4.689

GRAVY (calculated)

-0.365

Length

486 amino acids

Sequence
(BLAST)

001: MGSCLSAESM SPTTPGSPCS PGFGVKKRKN SKKRLGSRNS SFNRMRDDDD PSSTVPGRIF LNGSSEVACI FTQQGKKGPN QDAMVVWENF GSRKDTIFCG
101: VFDGHGPYGH MVAKSVRDSL PLKLSAYWEP KVPVEASPKP ITTVNNSEDA AAVSFVSAEE EPSRSINMEE ENMEESHSEL FQTLKEAFLK AYKVVDRELI
201: FNGSVDCFCS GTTAVTLIKQ GEYLVVGNVG DSRAVMGTRD GENGLVAVQL TVDLKPNLPA EEERIKKCRG RVFALKDEPE VCRVWLPNCD SPGLAMARAF
301: GDFCLKNFGL ISVPDVSFHR VTQKDEFIVL ASDGIWDVLS NEEVVGIVAA APSRSSAARA VVESAVRAWR YKYPTSKVDD CAAVCLYLDS NNTNAISTTA
401: SSISKLADEE LETPSENDDE SGLSGLGRSS SVRTSKEIAL DESEAERLIK EEEDNMDTEH GTEYSALEGV ARVNTLLNLP RFVPGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.