CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72270	Canola	cytosol	54.7	93.84
CDX91383	Canola	cytosol	81.77	92.5
CDY00978	Canola	cytosol	86.74	89.46
CDY46975	Canola	cytosol, mitochondrion, peroxisome	75.97	88.42
CDY34568	Canola	cytosol	33.7	87.14
CDX97493	Canola	cytosol	76.52	83.43
CDY37649	Canola	mitochondrion, plastid	93.65	78.84
CDY56581	Canola	cytosol	73.2	77.94
CDY63003	Canola	mitochondrion, plastid	93.65	77.4
AT5G36250.2	Thale cress	plastid	87.57	68.61
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	26.24	55.56
KRH36356	Soybean	cytosol	26.24	45.67
CDY53743	Canola	plastid	58.56	45.3
CDY53741	Canola	plastid	58.29	45.18
CDX92009	Canola	plastid	57.73	44.19
KRG93121	Soybean	plastid	43.92	43.56
CDX74239	Canola	plastid	57.73	43.0
CDY69821	Canola	plastid	45.58	41.98
CDY40298	Canola	cytosol, peroxisome, plastid	41.71	41.83
KRH01535	Soybean	cytosol	51.38	40.88
CDY51537	Canola	cytosol, peroxisome, plastid	58.84	39.96
CDY28706	Canola	cytosol, peroxisome, plastid	58.29	39.81
CDY67911	Canola	nucleus	37.85	39.03
CDY50503	Canola	nucleus	37.85	39.03
CDY21964	Canola	plastid	47.24	38.95
CDY15466	Canola	cytosol, peroxisome, plastid	45.58	38.92
CDY48559	Canola	plastid	47.24	38.86
CDX89881	Canola	plastid	45.58	38.82
CDY33350	Canola	cytosol, nucleus, plastid	51.1	38.54
CDY51389	Canola	cytosol, peroxisome, plastid	45.03	38.53
CDY35072	Canola	cytosol, peroxisome, plastid	51.1	38.38
CDX88554	Canola	nucleus	50.55	38.28
CDX95903	Canola	nucleus	36.46	37.61
CDX87369	Canola	nucleus	51.1	37.6
CDY05554	Canola	nucleus	38.12	37.5
CDY45023	Canola	cytosol	33.7	37.42
CDY28276	Canola	cytosol	33.7	37.42
CDY18810	Canola	cytosol, nucleus, peroxisome	35.91	37.36
CDX92097	Canola	nucleus	35.91	37.04
CDX72381	Canola	cytosol	33.15	36.81
CDY13509	Canola	cytosol	33.15	36.81
CDY53338	Canola	cytosol, mitochondrion, nucleus	37.85	36.73
CDX80553	Canola	cytosol	34.25	36.69
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	38.95	36.62
CDY25013	Canola	nucleus	37.85	36.53
CDY19742	Canola	nucleus	37.57	36.46
CDX88210	Canola	cytosol	33.98	36.39
KRH45222	Soybean	nucleus	16.02	25.0
CDY08060	Canola	plastid	20.72	21.19
CDX74112	Canola	plastid	20.44	20.9
CDY18847	Canola	cytosol	18.78	20.86
CDX82702	Canola	nucleus	18.78	15.11
CDY05716	Canola	cytosol	26.24	8.82
CDY35922	Canola	cytosol	26.24	8.79

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078JUB0	UniProt:A0A078JUB0
EnsemblPlants:CDY70364	ProteinID:CDY70364	ProteinID:CDY70364.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00098425001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EDDC14	:	:	:	:

Description

BnaCnng68000DBnaCnng68000D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUB0]

Coordinates

chrLK041890:-:463..2212

Molecular Weight (calculated)

40035.8 Da

IEP (calculated)

5.302

GRAVY (calculated)

-0.180

Length

362 amino acids

Sequence
(BLAST)

001: GKKGPNQDAM IVWENFGSME DTVFCGVFDG HGPYGHVIAK SVRDLLPLKL GSHLESYLSC EEVLKEISLN TANRMTSDNL VHISANGESR VYNKDQDMVQ
101: TLLTSIVKAY RFMDKELKMQ VDVDCFCSGT TAVTMVKQGQ HLVVGNIGDS RAVFDMRNKE NKLVLFQLTE DLKPDVPTEA ARIKRCRARI FALRDEPGVA
201: RLWLPNHNSP GLAMACAFGD FCLKDFGLIS VPDVSYRRLT EKDEFVVLAT DGIWDVLTNE EVVEIVAKTP TRCTAGRALV EAAVRNWRWK FSTSKVDDCA
301: VVCLFLDSKP DKLSTASFSV DKHISNGLTE LDTASTSIPG SGTESPELNG VDRIDTLVTT KE

Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.