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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45023 Canola cytosol 96.63 96.63
CDX72381 Canola cytosol 88.34 88.34
CDY13509 Canola cytosol 88.34 88.34
AT4G32950.1 Thale cress cytosol 83.44 83.44
PGSC0003DMT400005637 Potato cytosol 36.81 61.54
Solyc08g065670.2.1 Tomato peroxisome 48.47 51.63
VIT_04s0008g00740.t01 Wine grape cytosol 53.68 50.14
Solyc08g065500.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 51.53 50.0
CDX80553 Canola cytosol 50.31 48.52
GSMUA_Achr7P09260_001 Banana nucleus 48.77 47.75
CDX88210 Canola cytosol 49.39 47.63
KRH52174 Soybean cytoskeleton, cytosol, peroxisome 49.69 47.23
GSMUA_Achr2P15710_001 Banana cytosol, peroxisome, plastid 45.4 47.13
KRH05503 Soybean cytoskeleton, cytosol, peroxisome 49.08 46.51
Solyc08g065540.2.1 Tomato cytosol, nucleus, peroxisome 47.24 46.39
CDY72270 Canola cytosol 28.83 44.55
Zm00001d009234_P001 Maize cytosol, peroxisome, plastid 11.35 44.05
HORVU6Hr1G039940.1 Barley nucleus, peroxisome, plastid 46.32 42.66
TraesCS6B01G216900.1 Wheat nucleus, peroxisome, plastid 46.63 42.58
KRH15511 Soybean cytosol, nucleus, peroxisome 30.98 42.44
TraesCS6D01G178400.1 Wheat cytosol, nucleus, peroxisome 46.63 42.34
TraesCS6A01G187700.1 Wheat cytosol, nucleus, peroxisome 46.63 42.11
Zm00001d016332_P001 Maize cytosol, nucleus, peroxisome 46.01 39.79
EES04776 Sorghum cytosol, peroxisome, plastid 46.01 39.37
CDY18810 Canola cytosol, nucleus, peroxisome 40.18 37.64
Os02t0224100-01 Rice cytosol, peroxisome, plastid 44.48 37.28
CDY46975 Canola cytosol, mitochondrion, peroxisome 34.36 36.01
Solyc08g065680.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 22.39 35.61
CDX91383 Canola cytosol 34.36 35.0
CDY40298 Canola cytosol, peroxisome, plastid 38.34 34.63
CDY69821 Canola plastid 41.41 34.35
CDY70364 Canola cytosol, peroxisome 37.42 33.7
CDY05554 Canola nucleus 38.04 33.7
CDY53338 Canola cytosol, mitochondrion, nucleus 38.04 33.24
CDY50503 Canola nucleus 35.58 33.05
CDY67911 Canola nucleus 35.58 33.05
CDY19742 Canola nucleus 37.73 32.98
CDY25013 Canola nucleus 37.42 32.53
CDY00978 Canola cytosol 34.66 32.19
CDX92097 Canola nucleus 34.66 32.19
Zm00001d053566_P002 Maize nucleus, peroxisome, plastid 44.48 31.94
CDX95903 Canola nucleus 34.36 31.91
CDY15466 Canola cytosol, peroxisome, plastid 41.41 31.84
CDX89881 Canola plastid 41.41 31.76
CDY51389 Canola cytosol, peroxisome, plastid 41.1 31.68
Zm00001d009620_P001 Maize cytosol, peroxisome, plastid 15.34 31.45
CDY37649 Canola mitochondrion, plastid 41.41 31.4
CDY62635 Canola cytosol, mitochondrion, peroxisome, plastid 36.2 30.65
CDY63003 Canola mitochondrion, plastid 41.1 30.59
CDY56581 Canola cytosol 31.29 30.0
CDY53741 Canola plastid 42.33 29.55
CDY53743 Canola plastid 42.33 29.49
CDY21964 Canola plastid 39.57 29.39
CDY48559 Canola plastid 39.57 29.32
CDX92009 Canola plastid 41.41 28.54
CDX74239 Canola plastid 41.72 27.98
CDY33350 Canola cytosol, nucleus, plastid 40.49 27.5
CDX88554 Canola nucleus 40.18 27.41
CDX97493 Canola cytosol 27.61 27.11
CDY35072 Canola cytosol, peroxisome, plastid 39.88 26.97
CDX87369 Canola nucleus 40.18 26.63
CDY51537 Canola cytosol, peroxisome, plastid 42.64 26.08
CDY28706 Canola cytosol, peroxisome, plastid 42.33 26.04
CDY34568 Canola cytosol 11.04 25.71
CDX74112 Canola plastid 26.38 24.29
CDY08060 Canola plastid 25.46 23.45
CDY18847 Canola cytosol 22.09 22.09
CDX82702 Canola nucleus 19.94 14.44
CDY05716 Canola cytosol 26.38 7.99
CDY35922 Canola cytosol 26.38 7.96
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:A0A078GRZ6UniProt:A0A078GRZ6
EnsemblPlants:CDY28276ProteinID:CDY28276ProteinID:CDY28276.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00040016001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF315SMART:SM00331
SMART:SM00332SUPFAM:SSF81606UniParc:UPI0004EB2BDFSEG:seg::
Description
BnaC03g66830DBnaC03g66830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRZ6]
Coordinates
chrLK032217:-:38742..41606
Molecular Weight (calculated)
35476.3 Da
IEP (calculated)
6.840
GRAVY (calculated)
-0.207
Length
326 amino acids
Sequence
(BLAST)
001: MGFCFCLSSG GSTDGNQIYE IKDYGQENAV LHSEQHDHVH QGFGSVSSLA GGKGYNQDAA VLHLGYGTEG ALCGVFDGHG EKGELVSKIV RNQLPSLLSG
101: HMNNHSVTRD WKLIFETTFL LMDKRILKLK NTLDCSSSGT TAVLAVTHGN QVMVANLGDS RAVMIGTSEN GEIKVVQLTT DLKPSVPSEA ERIRKRNGRV
201: LALESEPHIQ RVWLPHENRP GLAMSRALGD FALKSYGVIA TPQVSTHQIT SRDQFLLLAS DGVWDVLSNE EVAVVVMKSE NEAGAANAVT EAAANAWRQK
301: YPTVKVDDIS VVCLFLNKRL HPQPRM
Best Arabidopsis Sequence Match ( AT4G32950.1 )
(BLAST)
001: MGFCFCLSSG GSTDKSQIYE ITDYGQENAV LYSDHHVVPQ NLGSVSSLAG GKGLNQDAAI LHLGYGTEEG ALCGVFDGHG PRGAFVSKNV RNQLPSILLG
101: HMNNHSVTRD WKLICETSCL EMDKRILKVK KIHDCSASGT TAVLAVKHGN QVMVANLGDS RAVMIGTSED GETKVAQLTN DLKPSVPSEA ERIRKRNGRV
201: LALESEPHIL RVWLPTENRP GLAMSRAFGD FLLKSYGVIA TPQVSTHQIT SSDQFLLLAS DGVWDVLSNE EVATVVMKSA SEAGAANEVA EAATNAWIQK
301: FPTVKIDDIS VVCLSLNKKH NPQPQI
Arabidopsis Description
Probable protein phosphatase 2C 61 [Source:UniProtKB/Swiss-Prot;Acc:O82637]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.