Factsheet for TraesCS6D01G178400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	96.66	97.2
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	95.26	96.61
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	96.1	95.57
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	80.22	74.04
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	76.88	73.21
EES04776	Sorghum	cytosol, peroxisome, plastid	76.6	72.18
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	30.92	69.81
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	54.04	61.78
PGSC0003DMT400005637	Potato	cytosol	31.75	58.46
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	73.26	57.93
GSMUA_Achr7P09260_001	Banana	nucleus	51.53	55.56
VIT_04s0008g00740.t01	Wine grape	cytosol	50.7	52.15
Solyc08g065670.2.1	Tomato	peroxisome	44.29	51.96
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	47.35	49.56
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	45.96	49.11
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	46.8	48.84
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	44.57	48.19
CDY45023	Canola	cytosol	43.45	47.85
Bra034542.1-P	Field mustard	cytosol	43.45	47.85
KRH15511	Soybean	cytosol, nucleus, peroxisome	31.48	47.48
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	43.18	46.83
CDY28276	Canola	cytosol	42.34	46.63
CDX80553	Canola	cytosol	43.73	46.45
AT4G32950.1	Thale cress	cytosol	41.5	45.71
CDX72381	Canola	cytosol	41.23	45.4
CDX88210	Canola	cytosol	42.62	45.27
Bra009875.1-P	Field mustard	cytosol	42.62	45.27
Bra037033.1-P	Field mustard	cytosol	40.95	45.09
CDY13509	Canola	cytosol	40.95	45.09
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	41.5	40.49
TraesCS1D01G229600.2	Wheat	mitochondrion	40.67	39.78
TraesCS1D01G229700.1	Wheat	mitochondrion	40.39	39.4
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.73	38.05
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	44.85	37.35
TraesCS4D01G159700.1	Wheat	cytosol	45.13	36.99
TraesCS5D01G155800.1	Wheat	cytosol	43.45	36.53
TraesCS6D01G181000.1	Wheat	mitochondrion	44.29	30.7
TraesCS2D01G273100.1	Wheat	mitochondrion	42.62	28.92
TraesCS7D01G240800.1	Wheat	mitochondrion	45.96	28.7
TraesCS2D01G144500.3	Wheat	cytosol	26.18	20.39
TraesCS6D01G174700.1	Wheat	plastid	29.8	9.85

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6D01G178400	EnsemblPlants:TraesCS6D01G178400.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:186767543..186769966

Molecular Weight (calculated)

38356.5 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.181

Length

359 amino acids

Sequence
(BLAST)

001: MGICASSEHL GQQGQEADES IVYVMDEEGG GGASSPRKVA SLFSQKGKKG PNQDAVILCQ GFGMEDGVFC GVFDGHGRCG HLVSKLVRDY LPFMVLSHRN
101: ALLLADADAD ADADDPVFSD ASPSSSADSS GNSSPHPSQM LEEWREACSN AFKAMDNELK LQANMDCAFS GTTAVCAIKQ GKDLIIANLG DSRAVLATMS
201: GAGYLKAVQL TTDQKPGLPE EAERIKRCEG RVFALREEPG VMRVWLPGEN LPGLAMARAL GDSRLKHHGV ISTPQVTAHR ISDADLFIIL ATDGVWDVLS
301: NEEVVSIVCA TPRKQHASKA VVEAAVQRWK TKYPSSRVDD CSAVCLFLHD HTAAAPTKL

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.