Factsheet for TraesCS4D01G159700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G162100.1	Wheat	cytosol, mitochondrion, peroxisome	98.63	98.63
HORVU4Hr1G044610.4	Barley	plasma membrane	97.72	97.72
Os11t0417400-01	Rice	plasma membrane	80.14	81.25
KXG30134	Sorghum	nucleus	75.11	71.21
Zm00001d050614_P001	Maize	cytosol, nucleus, peroxisome	74.43	71.18
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	36.99	45.13
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	43.84	44.55
TraesCS5D01G155800.1	Wheat	cytosol	43.38	44.5
TraesCS1D01G229600.2	Wheat	mitochondrion	33.79	40.33
TraesCS1D01G229700.1	Wheat	mitochondrion	33.33	39.67
TraesCS6D01G181000.1	Wheat	mitochondrion	46.8	39.58
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	32.88	39.13
TraesCS7D01G240800.1	Wheat	mitochondrion	50.23	38.26
TraesCS2D01G273100.1	Wheat	mitochondrion	45.43	37.62
TraesCS2D01G144500.3	Wheat	cytosol	23.29	22.13
TraesCS6D01G174700.1	Wheat	plastid	22.6	9.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF289	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4D01G159700	EnsemblPlants:TraesCS4D01G159700.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr4D:-:230904615..230910306

Molecular Weight (calculated)

47703.6 Da

IEP (calculated)

6.826

GRAVY (calculated)

-0.389

Length

438 amino acids

Sequence
(BLAST)

001: MGSCLPADQR PMEVAALPGK VGGGRRRGEE APGRIAGIGT GNVACLFTRQ GKKGTNQDAM VAWENFNGRS DTVFCGVFDG HGPHGHLVAR KVRDTLPLKL
101: CDLIYCDYGE SPTSNSDGSV LEESLSPYPD AEDKSSTFTA QKEEHLEFFD SMKESFRKAF RVMDKELKLH RNIDSICSGT TAVTLIKQGQ DLIVGNLGDS
201: RAVLGTRDQN GHLVAHQLTV DLKPDHPREA RRIKRCNGRV FAHQDEPDVA RLWLPNCNSP GLAMARAFGD FCLKDFGLIS VPEVTYRRIM EKDQFIVLAT
301: DGVWDVLSNQ EVVEVVASCS GRSGAARAVV DLANQTWKFK YPTSKTDDCA VICLFLSKDA AAGGLSGLSV ASKGIGSSPG MPPRLRTPQH FSKRVIPEDA
401: DDECDPNISG DERSLEGFTR LNTLLTLPKF GDTSPTKK

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.