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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G159700.1 Wheat cytosol 81.25 80.14
HORVU4Hr1G044610.4 Barley plasma membrane 80.79 79.68
TraesCS4B01G162100.1 Wheat cytosol, mitochondrion, peroxisome 80.79 79.68
Zm00001d050614_P001 Maize cytosol, nucleus, peroxisome 73.15 69.0
KXG30134 Sorghum nucleus 72.69 67.97
Os07t0566200-01 Rice plasma membrane 43.06 43.56
Os08t0500300-01 Rice plasma membrane 51.39 41.81
Os02t0224100-01 Rice cytosol, peroxisome, plastid 37.27 41.39
Os04t0321800-02 Rice peroxisome 43.98 41.3
Os11t0109000-01 Rice cytosol, peroxisome, plastid 40.05 41.19
Os02t0471500-01 Rice cytosol, mitochondrion, plasma membrane 46.99 39.19
Os05t0358500-01 Rice mitochondrion 31.48 38.53
Os12t0108600-00 Rice cytosol, peroxisome, plastid 40.28 38.24
Os07t0646100-00 Rice plasma membrane 22.45 25.94
Os02t0281000-01 Rice cytosol 23.15 9.21
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10EntrezGene:9268201ProteinID:ABA93159.2
EMBL:AK070536ProteinID:BAF28126.2ProteinID:BAT13771.1GO:GO:0003674GO:GO:0003824GO:GO:0004721
GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872InterPro:IPR001932InterPro:IPR036457
EnsemblPlantsGene:Os11g0417400EnsemblPlants:Os11t0417400-01PFAM:PF00481InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_dom
PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF289UniProt:Q2R637SMART:SM00332SUPFAM:SSF81606
UniParc:UPI0000D89A90RefSeq:XP_015617585.1RefSeq:XP_015617586.1RefSeq:XP_015617587.1RefSeq:XP_015617588.1RefSeq:XP_015617589.1
RefSeq:XP_015617590.1RefSeq:XP_015617591.1RefSeq:XP_015617592.1RefSeq:XP_015617593.1RefSeq:XP_015617594.1RefSeq:XP_015617595.1
RefSeq:XP_015617596.1RefSeq:XP_015617598.1RefSeq:XP_015617599.1RefSeq:XP_015617600.1SEG:seg:
Description
protein phosphatase 2C75, protein phosphatase 2C 75, protein phosphatase 121Protein phosphatase 2C domain containing protein. (Os11t0417400-01)
Coordinates
chr11:+:12855016..12861914
Molecular Weight (calculated)
47112.4 Da
IEP (calculated)
6.123
GRAVY (calculated)
-0.458
Length
432 amino acids
Sequence
(BLAST)
001: MGTCLTTAEQ RAMEVPAASV KGGGGRRSDE EAPGRIAGNG AGNVACLFTR QGKKGTNQDA MVAWENYNGR SDTVFCGVFD GHGPHGHLIA RKVRDILPSR
101: LCDLIYEDCG DSPTSNSDVS TLEENLSPYA DAECRSPTLA GQKEHQEFFN AMKESFRKAF KNVDKELKLQ RNIDSICSGT TAVTLIKQGH DLIVGNLGDS
201: RAVLGTRDQN DKLVAHQLTV DLKPDHPREA RRIRRCNGRV FAHQDEPDVA RLWLPNCNSP GLAMARAFGD FCLKDFGLIS VPDVTYRQIT EKDEFIVLAT
301: DGVWDVLSNQ EVVDVVASCS GRFAAARSVV DLANETWRFK YPTSKTDDCA VVCLFLNKYE VTGGLSGQPG YSPRMPALSG ITRPNSKRVT PDDVDDGSDS
401: NVSGDERSLD GFTRLNTLLA LPKFGDTSPT KK
Best Arabidopsis Sequence Match ( AT1G79630.8 )
(BLAST)
001: MNFFWTTGKE PGEASSTATT AETVEERSGS GRWRRPRDLK GGGDIEGIPQ VLGRLVSNGS SKIACLYTQQ GKKGTNQDAM LVFENFCSRD DTVFCGVFDG
101: HGPFGHMVAK KVRDTLPFTL LTQLKMTSES DQSSLVGANG FQIKCTEEEE VQTTESEQVQ KTESVTTMDE QWCELNPNVN NDELPEMYLP LKHAMLKSCQ
201: QIDKELKMHP TIDCFCSGTT SVTLIKQGED LVVGNIGDSR AVLATRDEDN ALLAVQLTID LKPDLPGESA RIQKCKGRVF ALQDEPEVAR VWLPNSDSPG
301: LAMARAFGDF CLKDYGLISV PDINYRRLTE RDQFIILASD GVWDVLSNKE AVDIVASAPS RSTAARALVD TAVRSWRIKY PTSKNDDCTV VCLFLQDSSV
401: AMEVSTNVKK DSPKEESIES VTNSTSKEED EIVPVKDEKI PESCGIESKM MTMTLAECIS VAQDDEEWSA LEGLTRVNSL LSIPRFLSGE LRSTSWRKWL
Arabidopsis Description
Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.