Factsheet for Zm00001d050614_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30134	Sorghum	nucleus	87.12	86.36
HORVU4Hr1G044610.4	Barley	plasma membrane	71.4	74.66
TraesCS4D01G159700.1	Wheat	cytosol	71.18	74.43
TraesCS4B01G162100.1	Wheat	cytosol, mitochondrion, peroxisome	70.96	74.2
Os11t0417400-01	Rice	plasma membrane	69.0	73.15
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	8.73	47.62
Zm00001d050415_P001	Maize	extracellular	13.54	45.26
Zm00001d006614_P001	Maize	plastid	41.05	43.52
Zm00001d037949_P001	Maize	mitochondrion	33.41	43.34
Zm00001d021817_P001	Maize	plastid	40.39	42.92
Zm00001d052852_P001	Maize	plastid	48.91	42.83
Zm00001d031329_P002	Maize	nucleus	48.25	40.55
Zm00001d011195_P001	Maize	mitochondrion	42.79	39.92
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	32.53	39.52
Zm00001d053259_P003	Maize	mitochondrion	42.58	39.0
Zm00001d005071_P001	Maize	cytosol	39.74	38.48
Zm00001d016474_P001	Maize	mitochondrion	43.45	37.83
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	11.79	33.96
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	30.57	30.84
Zm00001d008472_P001	Maize	cytosol	9.83	29.03
Zm00001d015610_P001	Maize	cytosol, peroxisome, plastid	8.95	27.33
Zm00001d007050_P001	Maize	mitochondrion	22.49	22.69
Zm00001d022347_P001	Maize	mitochondrion	22.49	22.29
Zm00001d053313_P005	Maize	cytosol, plastid	22.93	9.69

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:103653562	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	ProteinID:AQK52842.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
UniProt:K7U0E4	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF289	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002218928	EnsemblPlantsGene:Zm00001d050614
EnsemblPlants:Zm00001d050614_P001	EnsemblPlants:Zm00001d050614_T001	SEG:seg	:	:	:

Description

Probable protein phosphatase 2C 33

Coordinates

chr4:-:104549299..104563850

Molecular Weight (calculated)

49967.3 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.379

Length

458 amino acids

Sequence
(BLAST)

001: MMAAPSGGGC SGCLDCLHDI VHALSMGSCL TVEQRPAMAT GGAHKGRDVK ERKEKVEGRI IGNGVGNLAC MFTRQGKKGT NQDAMVVWEN FNGRSDTIFC
101: GVFDGHGPHG HIVARKVRDT LPSKLRALIY DDFGESPICN SDGSILEETL SPYADEEDKS PVSVEKGERQ ESFLSMKDSF RKAFRVTDKE LKLNRNIDSI
201: CSGSTAVTLI KQGQDLIVAN LGDSRAVLGT RDQNGRLVAH QLTVDLKPDH PREARRIRRC NGRVFAHQDE PDVSRLWLPN CNSPGLAMAR AFGDFCLKDF
301: GLICVPEVTY RQISKKDEFI ILATDGVWDV LTNQEVMDVV ASCSERSSAA RSIVDLANQA WRFKYPTSKT DDCATICLFL DVEDKAAGLS VSSSVASKGT
401: GSQAQPRKPR LHTSVPPEDV DDGSESNISG DERSLDSFTR LNTLLALPKL GDTSLKIK

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.