Factsheet for Zm00001d053566_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	72.91	87.8
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	30.62	87.42
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	15.86	85.71
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	57.49	73.73
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	57.93	73.26
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	56.83	72.27
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	57.27	72.02
Zm00001d015610_P001	Maize	cytosol, peroxisome, plastid	22.69	68.67
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	58.59	68.38
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	42.29	61.15
PGSC0003DMT400005637	Potato	cytosol	23.79	55.38
GSMUA_Achr7P09260_001	Banana	nucleus	40.53	55.26
VIT_04s0008g00740.t01	Wine grape	cytosol	38.77	50.43
Solyc08g065670.2.1	Tomato	peroxisome	33.26	49.35
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	35.9	48.51
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	35.02	47.89
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	34.8	47.73
CDX80553	Canola	cytosol	34.58	46.45
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	35.02	46.36
CDX88210	Canola	cytosol	34.36	46.15
Bra009875.1-P	Field mustard	cytosol	34.36	46.15
CDY45023	Canola	cytosol	33.04	46.01
Bra034542.1-P	Field mustard	cytosol	33.04	46.01
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	34.58	45.64
CDY28276	Canola	cytosol	31.94	44.48
CDY13509	Canola	cytosol	31.5	43.87
CDX72381	Canola	cytosol	31.5	43.87
Bra037033.1-P	Field mustard	cytosol	31.5	43.87
AT4G32950.1	Thale cress	cytosol	31.28	43.56
KRH15511	Soybean	cytosol, nucleus, peroxisome	22.69	43.28
Zm00001d050415_P001	Maize	extracellular	12.78	42.34
Zm00001d037949_P001	Maize	mitochondrion	31.72	40.79
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	18.06	40.0
Zm00001d006614_P001	Maize	plastid	33.92	35.65
Zm00001d021817_P001	Maize	plastid	33.48	35.27
Zm00001d005071_P001	Maize	cytosol	33.7	32.35
Zm00001d050614_P001	Maize	cytosol, nucleus, peroxisome	30.84	30.57
Zm00001d011195_P001	Maize	mitochondrion	32.6	30.14
Zm00001d053259_P003	Maize	mitochondrion	32.6	29.6
Zm00001d052852_P001	Maize	plastid	33.7	29.25
Zm00001d016474_P001	Maize	mitochondrion	33.26	28.71
Zm00001d031329_P002	Maize	nucleus	33.48	27.89
Zm00001d007050_P001	Maize	mitochondrion	21.81	21.81
Zm00001d008472_P001	Maize	cytosol	7.27	21.29
Zm00001d022347_P001	Maize	mitochondrion	21.59	21.21
Zm00001d053313_P005	Maize	cytosol, plastid	22.25	9.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	UniProt:A0A1D6QQA4	ProteinID:AQK59709.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0008432A1E	EnsemblPlantsGene:Zm00001d053566	EnsemblPlants:Zm00001d053566_P002	EnsemblPlants:Zm00001d053566_T002
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 72

Coordinates

chr4:-:234541057..234543600

Molecular Weight (calculated)

48054.5 Da

IEP (calculated)

6.065

GRAVY (calculated)

-0.257

Length

454 amino acids

Sequence
(BLAST)

001: MGICASSKRV EQEEEDSDEN VVYVVMDGQG GGGGGGWGGD GRGAAWERTV AASLFSQKGK KGPNQDAVIL CQRFLCCGLS SSPGNAAVLA HALDLGLGVG
101: GQKIPGTVLP ITSTKKITAA THHQFTVRSD KCTATTTNSP YFSEGFGMED GVFCGVFDGH GRCGQLVSKL ARDHLPFMIL SQRNALLLGS DDDGDGPAFS
201: DASPAASSST DGSRSERSSP APAQMLEEWR EACANAFEAM DRELGVQAKV DCDFSGTTAV CAIKQGEDLV VANLGDSRAV LATVSETGYL KAVQLTTDQK
301: PNVPQEAERI KRCNGRVFAL KDEASVPRVW LPDEDCPGLA MARSLGDHRL KRHGVVSEPE VAHRRVAPGD LFLVLATDGV WDVLSNQEVV SIVCATPRKQ
401: HASKAVAQAA AQRWRTRYPA SRVDDCSAAC LFLRDQDWAT SVAAAPKAKA AASR

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.