Factsheet for HORVU6Hr1G039940.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	96.61	95.26
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	95.76	94.96
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	95.2	93.35
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	77.68	72.94
EES04776	Sorghum	cytosol, peroxisome, plastid	77.4	71.92
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	78.53	71.47
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	30.79	68.55
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	53.39	60.19
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	73.73	57.49
PGSC0003DMT400005637	Potato	cytosol	31.64	57.44
GSMUA_Achr7P09260_001	Banana	nucleus	51.69	54.95
Solyc08g065670.2.1	Tomato	peroxisome	44.35	51.31
VIT_04s0008g00740.t01	Wine grape	cytosol	50.0	50.72
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	47.46	48.98
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	46.05	48.51
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	46.61	47.97
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	44.63	47.59
CDY45023	Canola	cytosol	43.79	47.55
Bra034542.1-P	Field mustard	cytosol	43.79	47.55
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	43.79	46.83
KRH15511	Soybean	cytosol, nucleus, peroxisome	31.36	46.64
CDX80553	Canola	cytosol	44.35	46.45
CDY28276	Canola	cytosol	42.66	46.32
AT4G32950.1	Thale cress	cytosol	42.09	45.71
Bra009875.1-P	Field mustard	cytosol	43.22	45.27
CDX88210	Canola	cytosol	43.22	45.27
CDX72381	Canola	cytosol	41.53	45.09
Bra037033.1-P	Field mustard	cytosol	41.24	44.79
CDY13509	Canola	cytosol	41.24	44.79
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	40.96	41.19
HORVU1Hr1G059130.3	Barley	mitochondrion	40.11	37.67
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.47	37.07
HORVU4Hr1G044610.4	Barley	plasma membrane	45.2	36.53
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	44.35	36.43
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	43.5	35.9
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	23.73	31.58
HORVU7Hr1G049260.4	Barley	nucleus	46.33	31.48
HORVU6Hr1G043680.5	Barley	mitochondrion, plastid	44.07	30.29
HORVU2Hr1G084080.1	Barley	cytosol, plastid	9.6	21.79
HORVU6Hr1G040540.8	Barley	peroxisome, plastid	29.38	9.69

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G039940	EnsemblPlants:HORVU6Hr1G039940.1	InterPro:IPR001932	InterPro:IPR036457
UniProt:M0ZD44	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294DAF8	SEG:seg

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0ZD44]

Coordinates

chrchr6H:+:210762786..210767184

Molecular Weight (calculated)

37866.0 Da

IEP (calculated)

5.598

GRAVY (calculated)

-0.166

Length

354 amino acids

Sequence
(BLAST)

001: MGICASSEHL GQQGQDADES IVYVMDEEGG GGASSPRKVA SLFSQKGKKG PNQDAVILCQ GFGMEDGVFC GVFDGHGRCG HLVSKLVRDY LPFMVLSHRN
101: ALLLADAEAN ADDPVFSDAS PSSSADSSGN SSPHPSQMLE EWTEACTNAF KAMDNELKLQ ANMDCAFSGT TAVCAIKQGK DLIIANLGDS RAVLATMSGA
201: CYLKAVQLTT DQKPGLPEEA ERIKRCEGRV FALREEPGVM RVWLPGENLP GLAMARALGD SRLKHHGVIS TPQVTGHRIS EADLFIILAT DGVWDVLSNE
301: EVVSIVCATP RKQHASKAVA EAAVQRWKTK YPSSRVDDCS AVCLFLHDAA ARKI

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.