Factsheet for GSMUA_Achr2P15710_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09260_001	Banana	nucleus	64.33	60.66
PGSC0003DMT400005637	Potato	cytosol	36.94	59.49
TraesCS6B01G216900.1	Wheat	nucleus, peroxisome, plastid	61.47	54.06
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	61.78	54.04
HORVU6Hr1G039940.1	Barley	nucleus, peroxisome, plastid	60.19	53.39
TraesCS6A01G187700.1	Wheat	cytosol, nucleus, peroxisome	61.15	53.19
VIT_04s0008g00740.t01	Wine grape	cytosol	58.92	53.01
Solyc08g065670.2.1	Tomato	peroxisome	50.96	52.29
Zm00001d016332_P001	Maize	cytosol, nucleus, peroxisome	60.83	50.66
EES04776	Sorghum	cytosol, peroxisome, plastid	60.19	49.61
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	52.55	49.11
Os02t0224100-01	Rice	cytosol, peroxisome, plastid	60.83	49.1
Zm00001d009234_P001	Maize	cytosol, peroxisome, plastid	13.06	48.81
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	50.64	47.89
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	51.27	46.94
AT5G26010.1	Thale cress	cytosol, nucleus, peroxisome	49.36	46.83
Bra034542.1-P	Field mustard	cytosol	48.09	46.32
CDY45023	Canola	cytosol	48.09	46.32
CDX80553	Canola	cytosol	49.68	46.15
Zm00001d009620_P001	Maize	cytosol, peroxisome, plastid	23.25	45.91
CDX88210	Canola	cytosol	49.36	45.86
Bra009875.1-P	Field mustard	cytosol	49.36	45.86
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	21.02	45.83
CDY28276	Canola	cytosol	47.13	45.4
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	49.68	45.35
AT4G32950.1	Thale cress	cytosol	46.18	44.48
CDY13509	Canola	cytosol	45.86	44.17
CDX72381	Canola	cytosol	45.86	44.17
Bra037033.1-P	Field mustard	cytosol	45.86	44.17
KRH15511	Soybean	cytosol, nucleus, peroxisome	33.44	44.12
GSMUA_Achr11P...	Banana	mitochondrion	46.5	42.69
Zm00001d053566_P002	Maize	nucleus, peroxisome, plastid	61.15	42.29
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	46.82	42.0
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	42.36	38.0
GSMUA_Achr6P27920_001	Banana	mitochondrion	46.5	37.63
GSMUA_Achr8P28420_001	Banana	plastid	48.41	36.89
GSMUA_Achr9P07440_001	Banana	nucleus	47.77	36.76
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	23.89	36.59
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	48.41	36.1
GSMUA_Achr9P24510_001	Banana	plastid	47.45	35.48
GSMUA_Achr3P04090_001	Banana	plastid	50.64	34.87
GSMUA_Achr9P01810_001	Banana	plastid	47.77	34.48
GSMUA_Achr5P22360_001	Banana	plastid	49.68	33.33
GSMUA_Achr8P17470_001	Banana	plastid	49.36	33.19
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	10.83	27.42
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.52	25.11
GSMUA_Achr3P24900_001	Banana	cytosol	26.75	22.4
GSMUA_Achr8P05980_001	Banana	cytosol	25.16	19.8
GSMUA_Achr10P...	Banana	mitochondrion	27.39	19.55
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	24.84	14.44
GSMUA_Achr10P...	Banana	cytosol	26.11	8.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr2G15710_001	EnsemblPlants:GSMUA_Achr2P15710_001	EnsemblPlants:GSMUA_Achr2T15710_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0S8B2	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF315	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00029611E8
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 12 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15710_001]

Coordinates

chr2:-:16891267..16893122

Molecular Weight (calculated)

34490.6 Da

IEP (calculated)

4.590

GRAVY (calculated)

-0.240

Length

314 amino acids

Sequence
(BLAST)

001: MGICFSSASL EKQVRDENSV FVLEDDDSCP ERGMRRLACL YSQQGKKGLN QDAAILCKDY GVEDGVFCGV FDGHGRSGHI VSRMVRDNLP ALLLSQHNAL
101: LLDDEDHRSA GGDDTSSADD MDNELEEQLH LDCSCSGSTA VSVIQQGRDM IIANLGDSRA VLGTVSVDGR LEAVQLTIDL KPNVPQEAER IKKNNGRVFA
201: RKDEPHVQRV WLPDVDFPGL AMARAFGDFE LKNYGVISIP QVAYHRLSDR DRFVVLATDG VWDVLDNEMV VSIVSSTGKK EEASKAVVEA AVRAWRFTFP
301: SSKVDDCSAA CLFF

Best Arabidopsis Sequence Match ( AT1G03590.1 )
(BLAST)

001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT

Arabidopsis Description

PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.