Factsheet for GSMUA_Achr6P17200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27920_001	Banana	mitochondrion	91.94	29.38
GSMUA_Achr8P28420_001	Banana	plastid	74.19	22.33
GSMUA_Achr9P07440_001	Banana	nucleus	61.29	18.63
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	49.19	17.43
GSMUA_Achr9P01810_001	Banana	plastid	46.77	13.33
GSMUA_Achr8P17470_001	Banana	plastid	50.0	13.28
GSMUA_Achr3P04090_001	Banana	plastid	47.58	12.94
GSMUA_Achr5P22360_001	Banana	plastid	44.35	11.75
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	33.06	11.71
GSMUA_Achr7P09260_001	Banana	nucleus	31.45	11.71
GSMUA_Achr11P...	Banana	mitochondrion	32.26	11.7
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	27.42	10.83
GSMUA_Achr9P24510_001	Banana	plastid	33.87	10.0
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	32.26	9.5
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.71	7.76
GSMUA_Achr3P24900_001	Banana	cytosol	21.77	7.2
GSMUA_Achr8P05980_001	Banana	cytosol	22.58	7.02
GSMUA_Achr10P...	Banana	mitochondrion	20.16	5.68
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	20.97	4.81
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	4.03	3.47
GSMUA_Achr10P...	Banana	cytosol	15.32	1.86

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G17200_001	EnsemblPlants:GSMUA_Achr6P17200_001	EnsemblPlants:GSMUA_Achr6T17200_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0T7R8	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SUPFAM:SSF81606	UniParc:UPI000295E057	SEG:seg

Description

Putative Probable protein phosphatase 2C 14 [Source:GMGC_GENE;Acc:GSMUA_Achr6G17200_001]

Coordinates

chr6:+:11577860..11578664

Molecular Weight (calculated)

13827.4 Da

IEP (calculated)

5.781

GRAVY (calculated)

-0.356

Length

124 amino acids

Sequence
(BLAST)

001: MVARKVRDIL PLKLRANCEV YVGNDECREN NISSTRSMSS EETSSLTQSK ASVGFEERVE HSETLTILKD SFLKAFRIVD KELRLHPDID CFYSGTTAVT
101: MVKQGQDLVI GNVGDSRAVL GTRD

Best Arabidopsis Sequence Match ( AT5G36250.3 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG VRNIQAQCQN KCGLVSSFS

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.