Factsheet for GSMUA_Achr9P01810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07440_001	Banana	nucleus	55.4	59.07
GSMUA_Achr8P28420_001	Banana	plastid	55.63	58.74
GSMUA_Achr6P27920_001	Banana	mitochondrion	50.57	56.7
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	44.6	55.43
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	18.16	54.86
GSMUA_Achr8P17470_001	Banana	plastid	57.47	53.53
GSMUA_Achr3P04090_001	Banana	plastid	53.1	50.66
GSMUA_Achr5P22360_001	Banana	plastid	54.25	50.43
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	34.48	47.77
GSMUA_Achr11P...	Banana	mitochondrion	36.78	46.78
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	13.33	46.77
GSMUA_Achr9P24510_001	Banana	plastid	44.6	46.19
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	36.78	45.71
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	43.68	45.13
GSMUA_Achr7P09260_001	Banana	nucleus	34.25	44.74
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.94	29.68
GSMUA_Achr3P24900_001	Banana	cytosol	24.83	28.8
GSMUA_Achr8P05980_001	Banana	cytosol	23.22	25.31
GSMUA_Achr10P...	Banana	mitochondrion	23.68	23.41
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	22.53	18.15
GSMUA_Achr10P...	Banana	cytosol	24.6	10.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G01810_001	EnsemblPlants:GSMUA_Achr9P01810_001	EnsemblPlants:GSMUA_Achr9T01810_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TWN8	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294CDF2
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 33 [Source:GMGC_GENE;Acc:GSMUA_Achr9G01810_001]

Coordinates

chr9:-:1393369..1398572

Molecular Weight (calculated)

47780.7 Da

IEP (calculated)

8.131

GRAVY (calculated)

-0.326

Length

435 amino acids

Sequence
(BLAST)

001: MGSCLSTGGC STPSSVSSPT SPKWPGSRRL RRSSGSEEQL HRISGRLFLN GATDCASLFT QQGKKGINQD AMIVWENFGS RNDTVFCGVF DGHGPLGHMV
101: AKRVRDVLPL KLTDDWKYST KFEEKDEHSQ NLKMLKDSLL KAFRNMDKEL KQKPGFDCFS SGSTAVTLIK QGQELVIGHV GDSRAVLGTR DKNNSLTAVQ
201: LTVDLKPNLP SEAERIRQCS GRVFALRTEP DVLRVWLPNG DSPGLAMTRA FGDFCLKDFG LISVPEISCR RLTDRDEFII LASDGVWDVL SNKEVVDIVA
301: SAPARSSAAS CLVQSAVKAW RLKYPTSRID DCAVVCLFLN AEASNISSIR TRSLNATNAG CYEQEATSSK SLACLSTVSS NETLQYVIGE GPNGNCQDLN
401: SSRQRKELIT RTEVYHVIDF RCKDCTAYNT IPSLH

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.