Factsheet for GSMUA_Achr3P04090_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	62.06	80.86
GSMUA_Achr5P22360_001	Banana	plastid	72.15	70.3
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	68.64	61.25
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	19.08	60.42
GSMUA_Achr9P07440_001	Banana	nucleus	51.75	57.84
GSMUA_Achr8P28420_001	Banana	plastid	52.19	57.77
GSMUA_Achr6P27920_001	Banana	mitochondrion	48.03	56.44
CDX88554	Canola	nucleus	57.02	54.39
CDY33350	Canola	cytosol, nucleus, plastid	57.24	54.38
AT1G16220.1	Thale cress	nucleus	58.33	54.18
CDY35072	Canola	cytosol, peroxisome, plastid	57.24	54.15
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	57.24	54.15
GSMUA_Achr9P01810_001	Banana	plastid	50.66	53.1
Bra035131.1-P	Field mustard	nucleus	56.36	52.77
GSMUA_Achr8P17470_001	Banana	plastid	53.95	52.68
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	59.21	52.43
CDX87369	Canola	nucleus	56.36	52.24
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	58.55	51.84
AT1G79630.1	Thale cress	nucleus	57.02	51.59
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	34.87	50.64
GSMUA_Achr9P24510_001	Banana	plastid	46.05	50.0
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	12.94	47.58
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	57.46	47.46
GSMUA_Achr7P09260_001	Banana	nucleus	34.65	47.45
GSMUA_Achr11P...	Banana	mitochondrion	35.31	47.08
Solyc10g005640.2.1	Tomato	nucleus	56.8	46.58
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	42.11	45.61
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	34.87	45.43
GSMUA_Achr3P24900_001	Banana	cytosol	21.71	26.4
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.28	25.57
GSMUA_Achr8P05980_001	Banana	cytosol	19.96	22.81
GSMUA_Achr10P...	Banana	mitochondrion	20.83	21.59
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	19.74	16.67
GSMUA_Achr10P...	Banana	cytosol	23.46	10.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G04090_001	EnsemblPlants:GSMUA_Achr3P04090_001	EnsemblPlants:GSMUA_Achr3T04090_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0SBM7	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002954232
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 66 [Source:GMGC_GENE;Acc:GSMUA_Achr3G04090_001]

Coordinates

chr3:+:2606601..2612139

Molecular Weight (calculated)

50318.6 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.447

Length

456 amino acids

Sequence
(BLAST)

001: MGSCLSSSSS PATVDRTLTA GPRGGGSSGL SRFRSRSWRG RKKAMKEKQK RGGGGRRRAA VDGSGEAEED ELDRVPGRMF LNGTSEAACL YTQQGRKGTN
101: QDAMIVWENF SLTKDTIFCG VFDGHGPYGH MVSKKVRDSL PLKLSTQWRA NDECGESLDV DENEKLPEMY LPLKQSFLKS FKSMDKELKF HPTIDCFCSG
201: TTAVTVVKQG QDLVIGNIGD SRAIMGTRDK ENNLTAVQLT VDLKPNLPRE AARIQQCKGR VFALQDEPEV ARVWLPNNDS PGLAMARAFG DFCLKDYGLI
301: SVPEISYRHL TEKDEFIVLA TDGVWDVLSN KEVVDVVGSA PTRSTAARAV VDCAVRAWRL KFPTSKIDDC AVVCLFLKPI SSSDPQETHE LITVDGPDLE
401: TVTERSQSTR SLADCISTTE EEEWSALEGI TRVNSLLNLP RFLSGDKRSS SWKKWL

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.