Factsheet for GSMUA_Achr6P27920_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	29.38	91.94
GSMUA_Achr8P28420_001	Banana	plastid	75.0	70.63
GSMUA_Achr9P07440_001	Banana	nucleus	67.01	63.73
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	23.2	62.5
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	51.29	56.86
GSMUA_Achr9P01810_001	Banana	plastid	56.7	50.57
GSMUA_Achr8P17470_001	Banana	plastid	58.25	48.39
GSMUA_Achr3P04090_001	Banana	plastid	56.44	48.03
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	37.63	46.5
GSMUA_Achr11P...	Banana	mitochondrion	40.46	45.91
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	41.24	45.71
GSMUA_Achr7P09260_001	Banana	nucleus	39.18	45.65
GSMUA_Achr5P22360_001	Banana	plastid	54.64	45.3
GSMUA_Achr9P24510_001	Banana	plastid	46.65	43.1
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	44.85	41.33
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.98	28.31
GSMUA_Achr3P24900_001	Banana	cytosol	25.26	26.13
GSMUA_Achr8P05980_001	Banana	cytosol	24.48	23.81
GSMUA_Achr10P...	Banana	mitochondrion	23.2	20.45
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	22.94	16.48
GSMUA_Achr10P...	Banana	cytosol	22.42	8.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G27920_001	EnsemblPlants:GSMUA_Achr6P27920_001	EnsemblPlants:GSMUA_Achr6T27920_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TAT7	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294C36D
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 33 [Source:GMGC_GENE;Acc:GSMUA_Achr6G27920_001]

Coordinates

chr6:+:28341491..28347899

Molecular Weight (calculated)

42853.0 Da

IEP (calculated)

7.130

GRAVY (calculated)

-0.267

Length

388 amino acids

Sequence
(BLAST)

001: MFLNGATSAA SLFTQRGRKG INQDAMLVWE NFGDRSDTVF CGVFDGHGPN GHKVARKVRD ILPLKLRASW EVYIGNDECR ENNISSTRSM NSEETSSMNL
101: NEESKASVGF EERVKHSETL TILKDSFLKA FRIVDKELRL HPDIDCFYSG TTAVTLVKQG QDLVIGNVGD SRAVLGTRDQ HNTLVAVQLT VDLKPNLPRE
201: AERIRRCRGR VFALRGEPEV ARVWLPNIDS PGLAMARALG DFCLKNFGLI SVPEISYRRI TEKDEFIVLA TDGVWDVLSN REVVKIVSTV SARSSAARIL
301: VESAVRAWKL KYPTSKIDDC AVVCLFLGID SSNDASIAKA SEVGLPLDAI EIGHDKQEPA GPTCLNQSGT IRARTANYQD KEATKDHV

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.