Factsheet for GSMUA_Achr10P12490_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.14	82.65
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	22.27	71.01
AT3G06270.1	Thale cress	cytosol	51.36	64.94
CDY08060	Canola	plastid	51.36	63.84
Bra001189.1-P	Field mustard	plastid	51.14	63.56
CDX74112	Canola	plastid	50.91	63.28
VIT_05s0020g02360.t01	Wine grape	cytosol	54.55	61.7
Bra040230.1-P	Field mustard	cytosol	45.68	61.66
CDY18847	Canola	cytosol	45.45	61.35
Solyc01g080400.2.1	Tomato	cytosol	56.59	60.14
PGSC0003DMT400081764	Potato	cytosol	56.36	59.9
KRH50972	Soybean	cytosol	55.91	58.16
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	56.59	57.77
KRH20951	Soybean	plastid	56.59	57.77
KRH02158	Soybean	cytosol	54.32	57.45
GSMUA_Achr8P05980_001	Banana	cytosol	51.14	56.39
GSMUA_Achr3P24900_001	Banana	cytosol	45.68	53.6
Os07t0646100-00	Rice	plasma membrane	44.32	52.14
TraesCS2D01G144500.3	Wheat	cytosol	46.14	44.03
TraesCS2B01G166100.3	Wheat	cytosol	46.36	43.68
TraesCS2A01G141100.2	Wheat	cytosol	46.36	43.5
EER99809	Sorghum	plastid	45.0	43.42
Zm00001d007050_P001	Maize	mitochondrion	44.77	43.39
Zm00001d022347_P001	Maize	mitochondrion	44.77	42.64
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	40.45	32.96
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	19.55	27.39
GSMUA_Achr7P09260_001	Banana	nucleus	20.0	26.43
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	19.77	24.86
GSMUA_Achr11P...	Banana	mitochondrion	19.09	24.56
GSMUA_Achr9P07440_001	Banana	nucleus	22.05	23.77
GSMUA_Achr9P01810_001	Banana	plastid	23.41	23.68
GSMUA_Achr8P28420_001	Banana	plastid	22.05	23.54
GSMUA_Achr6P27920_001	Banana	mitochondrion	20.45	23.2
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	18.41	23.14
GSMUA_Achr8P17470_001	Banana	plastid	24.32	22.91
GSMUA_Achr9P24510_001	Banana	plastid	20.91	21.9
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	20.68	21.62
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	7.05	21.53
GSMUA_Achr3P04090_001	Banana	plastid	21.59	20.83
GSMUA_Achr5P22360_001	Banana	plastid	21.82	20.51
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	5.68	20.16
GSMUA_Achr10P...	Banana	cytosol	45.91	19.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr10G12490_001
EnsemblPlants:GSMUA_Achr10P12490_001	EnsemblPlants:GSMUA_Achr10T12490_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0RHM5	PFAM:PF00481
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR24353
PANTHER:PTHR24353:SF115	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295A53E	SEG:seg	:

Description

Probable protein phosphatase 2C 35 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12490_001]

Coordinates

chr10:+:21519175..21522676

Molecular Weight (calculated)

47665.2 Da

IEP (calculated)

4.492

GRAVY (calculated)

-0.296

Length

440 amino acids

Sequence
(BLAST)

001: MGCVQGKRCG RYKKRCSSSC CHYQPSSIST DATDPFRIHE TDSSRGLPLH ALSGGFAVVP SAGICLRYAS LTQRGHYPDS PDRANQDSFC VKTGFQANPD
101: LHFFGVFDGH GQFGTQCSVF VRDNLADILS GNAHLSEDPV EAYHAAFLAA NSAIHDSEID DSMSGTTAIT VLVDGNTLYV ANVGDSRAVA GIWNGNRVMA
201: EDLSTDQTPY RKDEYERVKL CGARVLSVDQ VEGIVDPDIQ SWGDEEDGDG DPPRLWVQNG MYPGTAFTRS VGDSTAESIG VIGDPEVKTV KITPNHLFFV
301: VASDGIFEFL SSQAVVDMVS RFADPQDACL EIASESYKLW LENENRTDDI TVIVVQIRNI SDSYAAANEG AIQTNNNNAS LDPGKLKVER YIVSRSEVNL
401: SKKSSCLELQ SCLPDCSVDL SSARAAPSTQ SFHLNAINSD

Best Arabidopsis Sequence Match ( AT3G06270.1 )
(BLAST)

001: MGCVQCKCCS RYPSSSSDGD SRGPLEANGV LKGKDQKPLG SIHVPSPNFD MVYSVLSQRG YYPDSPDKEN QDTYCIKTEL QGNPNVHFFG VFDGHGVLGT
101: QCSNFVKERV VEMLSEDPTL LEDPEKAYKS AFLRVNEELH DSEIDDSMSG TTAITVLVVG DKIYVANVGD SRAVLAVKDR NRILAEDLSY DQTPFRKDEC
201: ERVKACGARV LSVDQVEGLK DPNIQTWANE ESEGGDPPRL WVQNGMYPGT AFTRSVGDFT AESIGVIAEP EVSMVHLSPN HLFFVVASDG IFEFLPSQAV
301: VDMVGRYADP RDGCAAAAAE SYKLWLEHEN RTDDITIIIV QIKKLSNE

Arabidopsis Description

Probable protein phosphatase 2C 35 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.