Factsheet for GSMUA_Achr5P22360_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P04090_001	Banana	plastid	70.3	72.15
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	52.35	70.0
GSMUA_Achr6P17190_001	Banana	endoplasmic reticulum, vacuole	17.95	58.33
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	62.82	57.53
GSMUA_Achr9P07440_001	Banana	nucleus	49.15	56.37
GSMUA_Achr8P28420_001	Banana	plastid	48.72	55.34
GSMUA_Achr6P27920_001	Banana	mitochondrion	45.3	54.64
GSMUA_Achr9P01810_001	Banana	plastid	50.43	54.25
CDY35072	Canola	cytosol, peroxisome, plastid	55.77	54.15
CDY33350	Canola	cytosol, nucleus, plastid	55.34	53.96
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	55.56	53.94
CDX88554	Canola	nucleus	54.7	53.56
AT1G16220.1	Thale cress	nucleus	55.34	52.75
GSMUA_Achr8P17470_001	Banana	plastid	52.14	52.25
Bra035131.1-P	Field mustard	nucleus	54.27	52.16
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	57.27	52.04
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	57.27	52.04
CDX87369	Canola	nucleus	54.49	51.83
AT1G79630.1	Thale cress	nucleus	54.7	50.79
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	33.33	49.68
GSMUA_Achr9P24510_001	Banana	plastid	43.8	48.81
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	56.2	47.64
Solyc10g005640.2.1	Tomato	nucleus	56.41	47.48
GSMUA_Achr7P09260_001	Banana	nucleus	32.91	46.25
GSMUA_Achr11P...	Banana	mitochondrion	33.33	45.61
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	41.03	45.61
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	33.33	44.57
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	11.75	44.35
GSMUA_Achr3P24900_001	Banana	cytosol	20.94	26.13
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.32	24.2
GSMUA_Achr8P05980_001	Banana	cytosol	19.44	22.81
GSMUA_Achr10P...	Banana	mitochondrion	20.51	21.82
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	19.66	17.04
GSMUA_Achr10P...	Banana	cytosol	22.65	10.35

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G22360_001	EnsemblPlants:GSMUA_Achr5P22360_001	EnsemblPlants:GSMUA_Achr5T22360_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0T0R1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002948AE1
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 66 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22360_001]

Coordinates

chr5:+:24445314..24451443

Molecular Weight (calculated)

50778.1 Da

IEP (calculated)

8.161

GRAVY (calculated)

-0.335

Length

468 amino acids

Sequence
(BLAST)

001: MGSCMSCSQT AAKEPAGASS SRSWSGSQSW KARKKLQEQE GAKGEGGGGG GRWPAAVSVF GDVREDELHR LPDRLFLNGA TEAACLYTQQ GKKGTNQDAM
101: IVWENFMLRS DTIFCGVFDG HGPFGHMVSK KVRDSLPLKL SDQWRANFNG NKGPHQFNSM SGGTDSKSIL KAFKIVDKEL KFNPTIDCFC SGTTAVTVVK
201: QGRDLVIGNL GDSRAVMGTR DKHNNLIAVE LTVDLKPNLP REAARIQQCK GRVFALQDEP EVARVWLPNS DSPGLAMARA FGDFCLKDYG LISVPDISYR
301: HLTDKDEFII LATDGVWDVL SNKEAVDIIA SAPTRGTAAR ALVDCAVRAW RLKFPTSKID DCAVVCLYLD NSSSSDQSQT VHSKKSPIQS AVSTAVVIDD
401: SIAGGAQVSR VPRVAERSQS SKSLADCISA TEDEEWSALE GVTRVNSLLN LPRFLSGDKG STSRKKWF

Best Arabidopsis Sequence Match ( AT1G79630.1 )
(BLAST)

001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL

Arabidopsis Description

Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.