Factsheet for GSMUA_Achr6P17190_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01590_001	Banana	cytosol, peroxisome, plastid	57.64	23.71
GSMUA_Achr6P27920_001	Banana	mitochondrion	62.5	23.2
GSMUA_Achr9P07440_001	Banana	nucleus	65.28	23.04
GSMUA_Achr8P28420_001	Banana	plastid	61.11	21.36
GSMUA_Achr2P15710_001	Banana	cytosol, peroxisome, plastid	45.83	21.02
GSMUA_Achr11P...	Banana	mitochondrion	46.53	19.59
GSMUA_Achr7P09260_001	Banana	nucleus	45.14	19.52
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	46.53	19.14
GSMUA_Achr3P04090_001	Banana	plastid	60.42	19.08
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	54.17	18.53
GSMUA_Achr8P17470_001	Banana	plastid	59.03	18.2
GSMUA_Achr9P01810_001	Banana	plastid	54.86	18.16
GSMUA_Achr5P22360_001	Banana	plastid	58.33	17.95
GSMUA_Achr9P24510_001	Banana	plastid	51.39	17.62
Zm00001d052852_P001	Maize	plastid	61.81	17.02
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	56.25	16.8
CDY35072	Canola	cytosol, peroxisome, plastid	56.25	16.8
CDX88554	Canola	nucleus	55.56	16.74
CDY33350	Canola	cytosol, nucleus, plastid	55.56	16.67
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	59.03	16.63
HORVU7Hr1G049260.4	Barley	nucleus	59.03	16.31
Os08t0500300-01	Rice	plasma membrane	59.72	16.2
AT1G16220.1	Thale cress	nucleus	54.86	16.09
TraesCS7A01G241800.1	Wheat	nucleus	58.33	16.03
Zm00001d031329_P002	Maize	nucleus	60.42	15.96
Bra035131.1-P	Field mustard	nucleus	53.47	15.81
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	56.25	15.73
CDX87369	Canola	nucleus	53.47	15.65
PGSC0003DMT400056929	Potato	cytosol, nucleus, peroxisome	55.56	15.53
AT1G79630.1	Thale cress	nucleus	54.17	15.48
KXG25674	Sorghum	mitochondrion	61.11	15.38
PGSC0003DMT400029340	Potato	cytosol, nucleus, peroxisome	56.94	14.86
Solyc10g005640.2.1	Tomato	nucleus	56.94	14.75
TraesCS7D01G240800.1	Wheat	mitochondrion	58.33	14.61
TraesCS7B01G137400.2	Wheat	plastid	58.33	14.61
Zm00001d008472_P001	Maize	cytosol	15.28	14.19
GSMUA_Achr5P21680_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.83	13.7
GSMUA_Achr3P24900_001	Banana	cytosol	25.0	9.6
GSMUA_Achr8P05980_001	Banana	cytosol	22.22	8.02
GSMUA_Achr10P...	Banana	mitochondrion	21.53	7.05
GSMUA_Achr3P24880_001	Banana	cytosol, plastid	25.0	6.67
GSMUA_Achr6P17200_001	Banana	cytosol, mitochondrion	3.47	4.03
GSMUA_Achr10P...	Banana	cytosol	22.92	3.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005575	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G17190_001
EnsemblPlants:GSMUA_Achr6P17190_001	EnsemblPlants:GSMUA_Achr6T17190_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0T7R7	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF383
SUPFAM:SSF81606	TMHMM:TMhelix	UniParc:UPI00029553F7	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17190_001]

Coordinates

chr6:+:11567566..11568320

Molecular Weight (calculated)

16801.6 Da

IEP (calculated)

8.147

GRAVY (calculated)

0.166

Length

144 amino acids

Sequence
(BLAST)

001: MCHASWNYYV VIICICIIMT CCYCSEHKLF TTYRLLRTIV YLIREAERIR RRRGLFALRD EPEVARVWLP NIDSPGLAMA RALGDFCLKN FGLISVPEIS
101: YRCITEKDEF IVLATDGVWD VLSNRDGKDC RYCFCKVLRS SYSC

Best Arabidopsis Sequence Match ( AT3G02750.3 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPGWIILC ECMMLSCGCM MDPLIMFIGF FFIPSIELAA
301: EAERIRKCRG RVFALRDEPE VCRVWLPNCD SPGLAMARAF GDFCLKDFGL ISVPDVSFRQ LTEKDEFIVL ATDGIWDVLS NEDVVAIVAS APSRSSAARA
401: LVESAVRAWR YKYPTSKVDD CAAVCLYLDS SNTNAISTAS SISKLEDGEE EELKATTEDD DASGPSGLGR SSTVRSGKEI ALDESETEKL IKEADNLDSE
501: PGTEYSALEG VARVNTLLNL PRFVPGK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.