Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88554 | Canola | nucleus | 83.53 | 88.08 |
| Bra035131.1-P | Field mustard | nucleus | 84.92 | 87.89 |
| CDX87369 | Canola | nucleus | 85.71 | 87.8 |
| AT1G16220.1 | Thale cress | nucleus | 73.81 | 75.76 |
| GSMUA_Achr4P01590_001 | Banana | cytosol, peroxisome, plastid | 44.05 | 63.43 |
| VIT_19s0015g01920.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 57.94 | 57.14 |
| GSMUA_Achr3P04090_001 | Banana | plastid | 51.59 | 57.02 |
| PGSC0003DMT400056929 | Potato | cytosol, nucleus, peroxisome | 56.35 | 55.15 |
| Solyc07g066260.2.1 | Tomato | cytosol, nucleus, peroxisome | 56.15 | 54.95 |
| GSMUA_Achr5P22360_001 | Banana | plastid | 50.79 | 54.7 |
| GSMUA_Achr6P17190_001 | Banana | endoplasmic reticulum, vacuole | 15.48 | 54.17 |
| Zm00001d052852_P001 | Maize | plastid | 55.56 | 53.54 |
| TraesCS7A01G241800.1 | Wheat | nucleus | 55.16 | 53.05 |
| HORVU7Hr1G049260.4 | Barley | nucleus | 54.76 | 52.98 |
| Os08t0500300-01 | Rice | plasma membrane | 55.75 | 52.92 |
| PGSC0003DMT400029340 | Potato | cytosol, nucleus, peroxisome | 55.95 | 51.09 |
| Zm00001d031329_P002 | Maize | nucleus | 54.96 | 50.83 |
| Solyc10g005640.2.1 | Tomato | nucleus | 55.16 | 50.0 |
| KXG25674 | Sorghum | mitochondrion | 55.16 | 48.6 |
| TraesCS7D01G240800.1 | Wheat | mitochondrion | 55.16 | 48.35 |
| TraesCS7B01G137400.2 | Wheat | plastid | 54.96 | 48.17 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 43.25 | 47.19 |
| AT4G03415.2 | Thale cress | plastid | 42.86 | 46.15 |
| AT3G02750.3 | Thale cress | plastid | 47.22 | 45.16 |
| AT5G36250.2 | Thale cress | plastid | 41.27 | 45.02 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 30.56 | 43.02 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 32.14 | 42.41 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 27.58 | 41.99 |
| AT5G27930.1 | Thale cress | nucleus | 30.95 | 41.82 |
| AT3G16800.2 | Thale cress | nucleus | 28.77 | 41.31 |
| Zm00001d008472_P001 | Maize | cytosol | 12.3 | 40.0 |
| AT4G32950.1 | Thale cress | cytosol | 25.79 | 39.88 |
| AT3G06270.1 | Thale cress | cytosol | 16.87 | 24.43 |
| AT2G20050.1 | Thale cress | cytosol | 25.0 | 11.52 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | EntrezGene:844302 | ProteinID:AAF68125.1 | ProteinID:AEE36275.1 |
| ProteinID:AEE36276.2 | ProteinID:ANM57733.1 | ProteinID:ANM57736.1 | ProteinID:ANM57737.1 | ArrayExpress:AT1G79630 | EnsemblPlantsGene:AT1G79630 |
| RefSeq:AT1G79630 | TAIR:AT1G79630 | RefSeq:AT1G79630-TAIR-G | EnsemblPlants:AT1G79630.1 | TAIR:AT1G79630.1 | EMBL:AY080600 |
| EMBL:AY114037 | EMBL:BX814900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_001319418.1 |
| RefSeq:NP_001320218.1 | RefSeq:NP_001320221.1 | RefSeq:NP_001320222.1 | RefSeq:NP_178081.2 | PFAM:PF00481 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF383 | UniProt:Q8RXZ4 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000009F4B4 | SEG:seg | : | : |
Description
Probable protein phosphatase 2C 18 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXZ4]
Coordinates
chr1:-:29962649..29965775
Molecular Weight (calculated)
55606.7 Da
IEP (calculated)
4.514
GRAVY (calculated)
-0.382
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCYSVDRT TGKEPGEASS TATTAETVEE RSGSGRWRRP RDLKGGGDIE GIPQVLGRLV SNGSSKIACL YTQQGKKGTN QDAMLVFENF CSRDDTVFCG
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL
101: VFDGHGPFGH MVAKKVRDTL PFTLLTQLKM TSESDQSSLV GANGFQIKCT EEEEVQTTES EQVQKTESVT TMDEQWCELN PNVNNDELPE MYLPLKHAML
201: KSCQQIDKEL KMHPTIDCFC SGTTSVTLIK QGEDLVVGNI GDSRAVLATR DEDNALLAVQ LTIDLKPDLP GESARIQKCK GRVFALQDEP EVARVWLPNS
301: DSPGLAMARA FGDFCLKDYG LISVPDINYR RLTERDQFII LASDGVWDVL SNKEAVDIVA SAPSRSTAAR ALVDTAVRSW RIKYPTSKND DCTVVCLFLQ
401: DSSVAMEVST NVKKDSPKEE SIESVTNSTS KEEDEIVPVK DEKIPESCGI ESKMMTMTLA ECISVAQDDE EWSALEGLTR VNSLLSIPRF LSGELRSTSW
501: RKWL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.