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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • peroxisome 1
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040530.1-P Field mustard cytosol, nucleus, peroxisome 84.64 87.07
CDY18810 Canola cytosol, nucleus, peroxisome 84.64 87.07
AT5G27930.1 Thale cress nucleus 80.73 77.48
KRG96758 Soybean cytosol, mitochondrion, peroxisome 73.46 71.27
VIT_14s0060g02070.t01 Wine grape mitochondrion 72.07 70.49
KRH68473 Soybean cytosol, mitochondrion, peroxisome 72.91 70.35
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 71.51 69.75
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 71.51 69.75
KRH33864 Soybean nucleus 70.67 68.75
KRG92929 Soybean nucleus 70.11 68.39
GSMUA_Achr11P... Banana mitochondrion 64.53 67.54
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 64.8 66.29
TraesCS1A01G228100.1 Wheat mitochondrion 58.38 61.83
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 58.66 61.76
TraesCS1B01G242200.1 Wheat mitochondrion 58.1 61.36
TraesCS1B01G242300.1 Wheat mitochondrion 58.1 61.36
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 59.5 60.34
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 58.66 59.66
Zm00001d037949_P001 Maize mitochondrion 58.66 59.49
Os05t0358500-01 Rice mitochondrion 56.98 57.79
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 58.66 56.3
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 57.82 56.25
TraesCS1D01G229600.2 Wheat mitochondrion 57.54 56.13
TraesCS1D01G229700.1 Wheat mitochondrion 57.54 55.98
HORVU1Hr1G059130.3 Barley mitochondrion 58.66 55.7
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 35.2 55.51
AT3G16800.2 Thale cress nucleus 54.19 55.27
TraesCS1A01G228200.1 Wheat mitochondrion 49.72 46.23
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 31.84 42.86
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 41.62 42.57
AT4G32950.1 Thale cress cytosol 37.43 41.1
AT5G26010.1 Thale cress cytosol, nucleus, peroxisome 36.87 39.88
AT5G01700.2 Thale cress cytosol, peroxisome, plastid 38.55 36.13
AT1G03590.1 Thale cress cytosol, nucleus, peroxisome, plastid 41.9 32.47
AT4G03415.2 Thale cress plastid 41.9 32.05
AT5G36250.2 Thale cress plastid 41.06 31.82
AT3G02750.3 Thale cress plastid 46.37 31.5
AT1G16220.1 Thale cress nucleus 42.46 30.96
AT1G79630.1 Thale cress nucleus 43.02 30.56
AT3G06270.1 Thale cress cytosol 25.98 26.72
AT2G20050.1 Thale cress cytosol 27.65 9.05
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10EntrezGene:819731ProteinID:AAF26133.1
ProteinID:AEE74270.1ProteinID:AEE74271.1EMBL:AK316795ProteinID:ANM64837.1ArrayExpress:AT3G05640EnsemblPlantsGene:AT3G05640
RefSeq:AT3G05640TAIR:AT3G05640RefSeq:AT3G05640-TAIR-GEnsemblPlants:AT3G05640.1TAIR:AT3G05640.1EMBL:AY050388
EMBL:AY093799Unigene:At.26583GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006470GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009414GO:GO:0009628
GO:GO:0009987GO:GO:0016020GO:GO:0016787GO:GO:0019538GO:GO:0040007GO:GO:0045926
GO:GO:0046872GO:GO:1904526InterPro:IPR001932InterPro:IPR036457RefSeq:NP_001326841.1RefSeq:NP_187215.1
RefSeq:NP_974230.1PFAM:PF00481PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281InterPro:PP2CInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746
PANTHER:PTHR13832PANTHER:PTHR13832:SF198UniProt:Q9M9W9SMART:SM00332SUPFAM:SSF81606UniParc:UPI00000486AE
SEG:seg:::::
Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
Coordinates
chr3:-:1640350..1643253
Molecular Weight (calculated)
39782.3 Da
IEP (calculated)
6.914
GRAVY (calculated)
-0.239
Length
358 amino acids
Sequence
(BLAST)
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.